Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.38■■□□□ 1.17
USH1GQ495M9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.37■■□□□ 1.17
USH1GQ495M9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
USH1GQ495M9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
USH1GQ495M9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.37■■□□□ 1.17
USH1GQ495M9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.37■■□□□ 1.17
USH1GQ495M9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.37■■□□□ 1.17
USH1GQ495M9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.37■■□□□ 1.17
USH1GQ495M9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 RCC2P6-201ENST00000526625 1557 ntBASIC22.37■■□□□ 1.17
USH1GQ495M9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.37■■□□□ 1.17
USH1GQ495M9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
USH1GQ495M9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
USH1GQ495M9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
USH1GQ495M9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.36■■□□□ 1.17
USH1GQ495M9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.36■■□□□ 1.17
USH1GQ495M9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.36■■□□□ 1.17
USH1GQ495M9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.36■■□□□ 1.17
USH1GQ495M9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.36■■□□□ 1.17
USH1GQ495M9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.36■■□□□ 1.17
USH1GQ495M9 AC012306.2-201ENST00000609350 630 ntBASIC22.36■■□□□ 1.17
USH1GQ495M9 AC097493.4-201ENST00000641197 219 ntBASIC22.36■■□□□ 1.17
USH1GQ495M9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.36■■□□□ 1.17
USH1GQ495M9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
USH1GQ495M9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
USH1GQ495M9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 CYP2D8P-201ENST00000433633 1490 ntBASIC22.35■■□□□ 1.17
USH1GQ495M9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.35■■□□□ 1.17
USH1GQ495M9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
USH1GQ495M9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.35■■□□□ 1.17
USH1GQ495M9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.35■■□□□ 1.17
USH1GQ495M9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.35■■□□□ 1.17
USH1GQ495M9 KRT18P21-201ENST00000515767 1272 ntBASIC22.35■■□□□ 1.17
USH1GQ495M9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 FITM1-202ENST00000559294 800 ntBASIC22.35■■□□□ 1.17
USH1GQ495M9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
USH1GQ495M9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.35■■□□□ 1.17
USH1GQ495M9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.35■■□□□ 1.17
USH1GQ495M9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
USH1GQ495M9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.35■■□□□ 1.17
USH1GQ495M9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.34■■□□□ 1.17
USH1GQ495M9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
USH1GQ495M9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
USH1GQ495M9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.34■■□□□ 1.17
USH1GQ495M9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.34■■□□□ 1.17
USH1GQ495M9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.34■■□□□ 1.17
USH1GQ495M9 AC008040.2-201ENST00000461049 708 ntBASIC22.34■■□□□ 1.17
USH1GQ495M9 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.34■■□□□ 1.17
USH1GQ495M9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.34■■□□□ 1.17
USH1GQ495M9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.34■■□□□ 1.17
USH1GQ495M9 AC011298.2-201ENST00000617989 482 ntBASIC22.34■■□□□ 1.17
USH1GQ495M9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.34■■□□□ 1.17
USH1GQ495M9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
USH1GQ495M9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
USH1GQ495M9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
USH1GQ495M9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
USH1GQ495M9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.33■■□□□ 1.17
USH1GQ495M9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.33■■□□□ 1.17
USH1GQ495M9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
USH1GQ495M9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.33■■□□□ 1.17
USH1GQ495M9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms