Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RSPO1Q2MKA7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RSPO1Q2MKA7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.88■□□□□ 0.29
RSPO1Q2MKA7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RSPO1Q2MKA7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RSPO1Q2MKA7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RSPO1Q2MKA7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 NBPF21P-201ENST00000425093 1451 ntBASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RSPO1Q2MKA7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 TEX21P-204ENST00000641479 1693 ntBASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 MIR4651-201ENST00000582622 73 ntBASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RSPO1Q2MKA7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 PRKY-204ENST00000533551 1019 ntBASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RSPO1Q2MKA7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RSPO1Q2MKA7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms