Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.74■□□□□ 0.91
CDR2Q01850 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 POM121L13P-201ENST00000422362 380 ntBASIC20.74■□□□□ 0.91
CDR2Q01850 ZNF815P-204ENST00000434898 1737 ntBASIC20.74■□□□□ 0.91
CDR2Q01850 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 AC008403.3-201ENST00000598924 454 ntBASIC20.74■□□□□ 0.91
CDR2Q01850 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDR2Q01850 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.74■□□□□ 0.91
CDR2Q01850 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.74■□□□□ 0.91
CDR2Q01850 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDR2Q01850 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.74■□□□□ 0.91
CDR2Q01850 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDR2Q01850 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR2Q01850 KRT8P8-201ENST00000434750 1448 ntBASIC20.73■□□□□ 0.91
CDR2Q01850 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR2Q01850 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR2Q01850 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CDR2Q01850 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.73■□□□□ 0.91
CDR2Q01850 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.73■□□□□ 0.91
CDR2Q01850 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR2Q01850 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR2Q01850 KRT18P16-201ENST00000510337 1294 ntBASIC20.73■□□□□ 0.91
CDR2Q01850 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.73■□□□□ 0.91
CDR2Q01850 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDR2Q01850 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR2Q01850 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR2Q01850 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.73■□□□□ 0.91
CDR2Q01850 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDR2Q01850 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDR2Q01850 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.72■□□□□ 0.91
CDR2Q01850 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR2Q01850 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR2Q01850 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR2Q01850 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.72■□□□□ 0.91
CDR2Q01850 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.72■□□□□ 0.91
CDR2Q01850 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.72■□□□□ 0.91
CDR2Q01850 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.72■□□□□ 0.91
CDR2Q01850 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDR2Q01850 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR2Q01850 AC087289.5-201ENST00000586076 3175 ntBASIC20.71■□□□□ 0.91
CDR2Q01850 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CDR2Q01850 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDR2Q01850 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDR2Q01850 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.71■□□□□ 0.91
CDR2Q01850 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.71■□□□□ 0.91
CDR2Q01850 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR2Q01850 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR2Q01850 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.71■□□□□ 0.91
CDR2Q01850 RNA5SP413-201ENST00000516373 109 ntBASIC20.71■□□□□ 0.91
CDR2Q01850 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDR2Q01850 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR2Q01850 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR2Q01850 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDR2Q01850 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.71■□□□□ 0.91
CDR2Q01850 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CDR2Q01850 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.7■□□□□ 0.91
CDR2Q01850 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDR2Q01850 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDR2Q01850 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CDR2Q01850 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.7■□□□□ 0.9
CDR2Q01850 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDR2Q01850 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.7■□□□□ 0.9
CDR2Q01850 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.7■□□□□ 0.9
CDR2Q01850 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDR2Q01850 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CDR2Q01850 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDR2Q01850 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.7■□□□□ 0.9
CDR2Q01850 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDR2Q01850 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.69■□□□□ 0.9
CDR2Q01850 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms