Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
YBX1P67809 AL121906.2-201ENST00000621597 723 ntBASIC18.99■□□□□ 0.63
YBX1P67809 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.99■□□□□ 0.63
YBX1P67809 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YBX1P67809 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.98■□□□□ 0.63
YBX1P67809 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
YBX1P67809 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 AL359736.2-201ENST00000621992 437 ntBASIC18.98■□□□□ 0.63
YBX1P67809 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
YBX1P67809 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.98■□□□□ 0.63
YBX1P67809 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
YBX1P67809 AC009237.14-201ENST00000609975 1594 ntBASIC18.98■□□□□ 0.63
YBX1P67809 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
YBX1P67809 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.97■□□□□ 0.63
YBX1P67809 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.97■□□□□ 0.63
YBX1P67809 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.97■□□□□ 0.63
YBX1P67809 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.97■□□□□ 0.63
YBX1P67809 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 KRASP1-201ENST00000407852 552 ntBASIC18.97■□□□□ 0.63
YBX1P67809 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.97■□□□□ 0.63
YBX1P67809 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
YBX1P67809 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.97■□□□□ 0.63
YBX1P67809 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.97■□□□□ 0.63
YBX1P67809 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.97■□□□□ 0.63
YBX1P67809 AC124016.1-201ENST00000609552 612 ntBASIC18.97■□□□□ 0.63
YBX1P67809 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
YBX1P67809 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
YBX1P67809 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 AP001271.2-201ENST00000624018 1556 ntBASIC18.97■□□□□ 0.63
YBX1P67809 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.97■□□□□ 0.63
YBX1P67809 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
YBX1P67809 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.96■□□□□ 0.63
YBX1P67809 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
YBX1P67809 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
YBX1P67809 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.96■□□□□ 0.63
YBX1P67809 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.96■□□□□ 0.63
YBX1P67809 GCSHP5-201ENST00000443090 522 ntBASIC18.96■□□□□ 0.63
YBX1P67809 AL158047.1-201ENST00000445918 881 ntBASIC18.96■□□□□ 0.63
YBX1P67809 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
YBX1P67809 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
YBX1P67809 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.96■□□□□ 0.63
YBX1P67809 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.96■□□□□ 0.63
YBX1P67809 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.96■□□□□ 0.63
YBX1P67809 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.96■□□□□ 0.63
YBX1P67809 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
YBX1P67809 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.96■□□□□ 0.63
YBX1P67809 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
YBX1P67809 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
YBX1P67809 AC093503.3-201ENST00000624917 2352 ntBASIC18.96■□□□□ 0.63
YBX1P67809 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
YBX1P67809 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
YBX1P67809 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
YBX1P67809 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.95■□□□□ 0.62
YBX1P67809 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.95■□□□□ 0.62
YBX1P67809 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.95■□□□□ 0.62
YBX1P67809 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms