Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.54■□□□□ 0.4
LSM3P62310 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LSM3P62310 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
LSM3P62310 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.54■□□□□ 0.4
LSM3P62310 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM3P62310 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM3P62310 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM3P62310 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM3P62310 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
LSM3P62310 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LSM3P62310 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LSM3P62310 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.54■□□□□ 0.4
LSM3P62310 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LSM3P62310 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM3P62310 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
LSM3P62310 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM3P62310 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM3P62310 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM3P62310 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM3P62310 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.53■□□□□ 0.4
LSM3P62310 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM3P62310 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.53■□□□□ 0.4
LSM3P62310 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LSM3P62310 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.53■□□□□ 0.4
LSM3P62310 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM3P62310 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.52■□□□□ 0.4
LSM3P62310 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.52■□□□□ 0.4
LSM3P62310 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LSM3P62310 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.52■□□□□ 0.4
LSM3P62310 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.52■□□□□ 0.4
LSM3P62310 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 OR6D1P-202ENST00000641007 5290 ntBASIC17.52■□□□□ 0.4
LSM3P62310 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LSM3P62310 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.52■□□□□ 0.4
LSM3P62310 MIR3621-201ENST00000580529 85 ntBASIC17.52■□□□□ 0.4
LSM3P62310 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM3P62310 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.52■□□□□ 0.39
LSM3P62310 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.52■□□□□ 0.39
LSM3P62310 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LSM3P62310 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.52■□□□□ 0.39
LSM3P62310 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM3P62310 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.52■□□□□ 0.39
LSM3P62310 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM3P62310 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LSM3P62310 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 AC099398.1-201ENST00000567919 2776 ntBASIC17.51■□□□□ 0.39
LSM3P62310 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LSM3P62310 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LSM3P62310 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LSM3P62310 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.51■□□□□ 0.39
LSM3P62310 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
LSM3P62310 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM3P62310 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM3P62310 DUX4L19-201ENST00000557448 1267 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms