Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH6P55285 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH6P55285 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH6P55285 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH6P55285 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH6P55285 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH6P55285 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH6P55285 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDH6P55285 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH6P55285 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH6P55285 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDH6P55285 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CDH6P55285 AP003097.1-201ENST00000530657 1135 ntBASIC20.23■□□□□ 0.83
CDH6P55285 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CDH6P55285 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH6P55285 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH6P55285 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH6P55285 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH6P55285 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH6P55285 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH6P55285 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDH6P55285 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 AC087289.5-201ENST00000586076 3175 ntBASIC20.22■□□□□ 0.83
CDH6P55285 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH6P55285 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CDH6P55285 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH6P55285 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH6P55285 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH6P55285 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH6P55285 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH6P55285 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CDH6P55285 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH6P55285 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH6P55285 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDH6P55285 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDH6P55285 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH6P55285 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDH6P55285 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH6P55285 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH6P55285 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH6P55285 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH6P55285 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH6P55285 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH6P55285 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH6P55285 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH6P55285 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH6P55285 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH6P55285 KRT8P8-201ENST00000434750 1448 ntBASIC20.2■□□□□ 0.82
CDH6P55285 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH6P55285 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH6P55285 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDH6P55285 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH6P55285 CD99P1-205ENST00000527459 561 ntBASIC20.2■□□□□ 0.82
CDH6P55285 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH6P55285 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH6P55285 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH6P55285 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH6P55285 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH6P55285 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms