Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
HMGA2P52926 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGA2P52926 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGA2P52926 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGA2P52926 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGA2P52926 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGA2P52926 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGA2P52926 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 AC104417.2-201ENST00000562989 1793 ntBASIC17.77■□□□□ 0.44
HMGA2P52926 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.77■□□□□ 0.44
HMGA2P52926 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.77■□□□□ 0.44
HMGA2P52926 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGA2P52926 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.77■□□□□ 0.44
HMGA2P52926 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.77■□□□□ 0.44
HMGA2P52926 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.77■□□□□ 0.44
HMGA2P52926 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HMGA2P52926 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HMGA2P52926 AC135050.7-201ENST00000624508 2218 ntBASIC17.77■□□□□ 0.44
HMGA2P52926 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HMGA2P52926 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGA2P52926 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGA2P52926 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGA2P52926 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGA2P52926 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGA2P52926 AC104581.1-202ENST00000635932 2618 ntBASIC17.77■□□□□ 0.43
HMGA2P52926 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HMGA2P52926 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.77■□□□□ 0.43
HMGA2P52926 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGA2P52926 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGA2P52926 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGA2P52926 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
HMGA2P52926 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGA2P52926 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HMGA2P52926 AC093787.1-201ENST00000450396 207 ntBASIC17.76■□□□□ 0.43
HMGA2P52926 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGA2P52926 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 FP475955.4-201ENST00000623131 1990 ntBASIC17.76■□□□□ 0.43
HMGA2P52926 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGA2P52926 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.76■□□□□ 0.43
HMGA2P52926 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGA2P52926 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
HMGA2P52926 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGA2P52926 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HMGA2P52926 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
HMGA2P52926 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGA2P52926 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HMGA2P52926 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGA2P52926 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.75■□□□□ 0.43
HMGA2P52926 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGA2P52926 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGA2P52926 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGA2P52926 AC090164.3-201ENST00000610780 2143 ntBASIC17.75■□□□□ 0.43
HMGA2P52926 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGA2P52926 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGA2P52926 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGA2P52926 AC120498.9-201ENST00000339021 3867 ntBASIC17.74■□□□□ 0.43
HMGA2P52926 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HMGA2P52926 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGA2P52926 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGA2P52926 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGA2P52926 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HMGA2P52926 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGA2P52926 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HMGA2P52926 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms