Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMSP52788 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.2■□□□□ 0.5
SMSP52788 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.2■□□□□ 0.5
SMSP52788 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMSP52788 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SMSP52788 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.19■□□□□ 0.5
SMSP52788 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.19■□□□□ 0.5
SMSP52788 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.19■□□□□ 0.5
SMSP52788 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMSP52788 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.19■□□□□ 0.5
SMSP52788 PGM5P4-201ENST00000421970 445 ntBASIC18.19■□□□□ 0.5
SMSP52788 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMSP52788 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.19■□□□□ 0.5
SMSP52788 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.19■□□□□ 0.5
SMSP52788 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.19■□□□□ 0.5
SMSP52788 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.19■□□□□ 0.5
SMSP52788 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.19■□□□□ 0.5
SMSP52788 C2orf69P4-201ENST00000565394 541 ntBASIC18.19■□□□□ 0.5
SMSP52788 AC233702.5-201ENST00000584107 538 ntBASIC18.19■□□□□ 0.5
SMSP52788 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMSP52788 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 AP000974.1-201ENST00000623909 2387 ntBASIC18.19■□□□□ 0.5
SMSP52788 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMSP52788 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMSP52788 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.18■□□□□ 0.5
SMSP52788 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.18■□□□□ 0.5
SMSP52788 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 TREX1-205ENST00000625293 1783 ntBASIC18.18■□□□□ 0.5
SMSP52788 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 RPS2P55-201ENST00000397318 883 ntBASIC18.18■□□□□ 0.5
SMSP52788 AC107956.1-201ENST00000494359 873 ntBASIC18.18■□□□□ 0.5
SMSP52788 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.18■□□□□ 0.5
SMSP52788 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.18■□□□□ 0.5
SMSP52788 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.18■□□□□ 0.5
SMSP52788 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.18■□□□□ 0.5
SMSP52788 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMSP52788 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMSP52788 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
SMSP52788 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.17■□□□□ 0.5
SMSP52788 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.17■□□□□ 0.5
SMSP52788 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.17■□□□□ 0.5
SMSP52788 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.17■□□□□ 0.5
SMSP52788 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.17■□□□□ 0.5
SMSP52788 AC239809.2-201ENST00000415381 517 ntBASIC18.17■□□□□ 0.5
SMSP52788 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.17■□□□□ 0.5
SMSP52788 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.17■□□□□ 0.5
SMSP52788 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 BX088651.1-201ENST00000540551 451 ntBASIC18.17■□□□□ 0.5
SMSP52788 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.17■□□□□ 0.5
SMSP52788 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SMSP52788 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMSP52788 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMSP52788 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms