Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CBX5P45973 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CBX5P45973 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.73■□□□□ 0.27
CBX5P45973 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX5P45973 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX5P45973 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.73■□□□□ 0.27
CBX5P45973 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.73■□□□□ 0.27
CBX5P45973 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.73■□□□□ 0.27
CBX5P45973 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CBX5P45973 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CBX5P45973 AL133373.2-201ENST00000623187 2828 ntBASIC16.73■□□□□ 0.27
CBX5P45973 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CBX5P45973 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CBX5P45973 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.72■□□□□ 0.27
CBX5P45973 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CBX5P45973 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.72■□□□□ 0.27
CBX5P45973 AL031432.3-201ENST00000607698 485 ntBASIC16.72■□□□□ 0.27
CBX5P45973 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CBX5P45973 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CBX5P45973 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CBX5P45973 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CBX5P45973 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.71■□□□□ 0.27
CBX5P45973 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.71■□□□□ 0.27
CBX5P45973 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.71■□□□□ 0.27
CBX5P45973 AC131212.1-201ENST00000613771 668 ntBASIC16.71■□□□□ 0.27
CBX5P45973 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CBX5P45973 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.71■□□□□ 0.27
CBX5P45973 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.71■□□□□ 0.26
CBX5P45973 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CBX5P45973 AC019069.1-201ENST00000610008 1333 ntBASIC16.7■□□□□ 0.26
CBX5P45973 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.7■□□□□ 0.26
CBX5P45973 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.7■□□□□ 0.26
CBX5P45973 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.7■□□□□ 0.26
CBX5P45973 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CBX5P45973 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CBX5P45973 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CBX5P45973 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CBX5P45973 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CBX5P45973 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CBX5P45973 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CBX5P45973 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms