Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA4P43681 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CHRNA4P43681 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CHRNA4P43681 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.65■□□□□ 0.74
CHRNA4P43681 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRNA4P43681 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CHRNA4P43681 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CHRNA4P43681 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.64■□□□□ 0.74
CHRNA4P43681 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CHRNA4P43681 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.64■□□□□ 0.73
CHRNA4P43681 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.64■□□□□ 0.73
CHRNA4P43681 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CHRNA4P43681 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 RN7SL471P-201ENST00000580476 299 ntBASIC19.64■□□□□ 0.73
CHRNA4P43681 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNA4P43681 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 KRT8P8-201ENST00000434750 1448 ntBASIC19.64■□□□□ 0.73
CHRNA4P43681 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHRNA4P43681 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CHRNA4P43681 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA4P43681 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA4P43681 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 AC239809.2-201ENST00000415381 517 ntBASIC19.63■□□□□ 0.73
CHRNA4P43681 TUBB8P6-201ENST00000436895 1288 ntBASIC19.63■□□□□ 0.73
CHRNA4P43681 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.63■□□□□ 0.73
CHRNA4P43681 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CHRNA4P43681 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CHRNA4P43681 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 AL032819.2-201ENST00000624543 2162 ntBASIC19.63■□□□□ 0.73
CHRNA4P43681 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHRNA4P43681 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA4P43681 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CHRNA4P43681 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRNA4P43681 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.62■□□□□ 0.73
CHRNA4P43681 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CHRNA4P43681 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CHRNA4P43681 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CHRNA4P43681 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CHRNA4P43681 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 FAM201B-201ENST00000458407 597 ntBASIC19.62■□□□□ 0.73
CHRNA4P43681 AC124016.1-201ENST00000609552 612 ntBASIC19.62■□□□□ 0.73
CHRNA4P43681 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRNA4P43681 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA4P43681 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA4P43681 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHRNA4P43681 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.61■□□□□ 0.73
CHRNA4P43681 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.61■□□□□ 0.73
CHRNA4P43681 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA4P43681 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA4P43681 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA4P43681 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CHRNA4P43681 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA4P43681 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.61■□□□□ 0.73
CHRNA4P43681 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA4P43681 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNA4P43681 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA4P43681 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA4P43681 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.61■□□□□ 0.73
CHRNA4P43681 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.61■□□□□ 0.73
CHRNA4P43681 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA4P43681 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA4P43681 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHRNA4P43681 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms