Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.68■□□□□ 0.74
HADHAP40939 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.68■□□□□ 0.74
HADHAP40939 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.68■□□□□ 0.74
HADHAP40939 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.68■□□□□ 0.74
HADHAP40939 AC026366.1-201ENST00000488803 879 ntBASIC19.68■□□□□ 0.74
HADHAP40939 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.68■□□□□ 0.74
HADHAP40939 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.68■□□□□ 0.74
HADHAP40939 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.68■□□□□ 0.74
HADHAP40939 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HADHAP40939 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.68■□□□□ 0.74
HADHAP40939 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HADHAP40939 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HADHAP40939 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.68■□□□□ 0.74
HADHAP40939 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HADHAP40939 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HADHAP40939 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.67■□□□□ 0.74
HADHAP40939 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.67■□□□□ 0.74
HADHAP40939 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HADHAP40939 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.67■□□□□ 0.74
HADHAP40939 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.67■□□□□ 0.74
HADHAP40939 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.67■□□□□ 0.74
HADHAP40939 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.67■□□□□ 0.74
HADHAP40939 AC008403.3-201ENST00000598924 454 ntBASIC19.67■□□□□ 0.74
HADHAP40939 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HADHAP40939 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.67■□□□□ 0.74
HADHAP40939 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.67■□□□□ 0.74
HADHAP40939 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.67■□□□□ 0.74
HADHAP40939 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HADHAP40939 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.67■□□□□ 0.74
HADHAP40939 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HADHAP40939 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HADHAP40939 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
HADHAP40939 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.66■□□□□ 0.74
HADHAP40939 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 KRT17P3-201ENST00000420566 1262 ntBASIC19.66■□□□□ 0.74
HADHAP40939 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.66■□□□□ 0.74
HADHAP40939 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.66■□□□□ 0.74
HADHAP40939 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.66■□□□□ 0.74
HADHAP40939 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HADHAP40939 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.66■□□□□ 0.74
HADHAP40939 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HADHAP40939 AC087289.5-201ENST00000586076 3175 ntBASIC19.66■□□□□ 0.74
HADHAP40939 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.66■□□□□ 0.74
HADHAP40939 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.65■□□□□ 0.74
HADHAP40939 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HADHAP40939 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.65■□□□□ 0.74
HADHAP40939 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HADHAP40939 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.65■□□□□ 0.74
HADHAP40939 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HADHAP40939 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.65■□□□□ 0.74
HADHAP40939 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.65■□□□□ 0.74
HADHAP40939 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.65■□□□□ 0.74
HADHAP40939 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.65■□□□□ 0.74
HADHAP40939 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.65■□□□□ 0.74
HADHAP40939 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 TMEM191A-211ENST00000637163 1067 ntBASIC19.65■□□□□ 0.74
HADHAP40939 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HADHAP40939 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.65■□□□□ 0.74
HADHAP40939 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.65■□□□□ 0.74
HADHAP40939 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HADHAP40939 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HADHAP40939 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HADHAP40939 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms