Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCK1P35558 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCK1P35558 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCK1P35558 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCK1P35558 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCK1P35558 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 AC093484.2-201ENST00000580996 2166 ntBASIC20.46■□□□□ 0.87
PCK1P35558 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCK1P35558 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCK1P35558 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.46■□□□□ 0.87
PCK1P35558 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.46■□□□□ 0.87
PCK1P35558 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCK1P35558 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
PCK1P35558 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.45■□□□□ 0.87
PCK1P35558 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.45■□□□□ 0.86
PCK1P35558 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCK1P35558 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.45■□□□□ 0.86
PCK1P35558 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.45■□□□□ 0.86
PCK1P35558 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
PCK1P35558 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.45■□□□□ 0.86
PCK1P35558 UNC93B4-201ENST00000505679 747 ntBASIC20.45■□□□□ 0.86
PCK1P35558 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.45■□□□□ 0.86
PCK1P35558 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCK1P35558 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.45■□□□□ 0.86
PCK1P35558 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PCK1P35558 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCK1P35558 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCK1P35558 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.44■□□□□ 0.86
PCK1P35558 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.44■□□□□ 0.86
PCK1P35558 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.44■□□□□ 0.86
PCK1P35558 UNC93B5-201ENST00000530315 699 ntBASIC20.44■□□□□ 0.86
PCK1P35558 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PCK1P35558 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.44■□□□□ 0.86
PCK1P35558 AL121829.2-201ENST00000620908 328 ntBASIC20.44■□□□□ 0.86
PCK1P35558 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCK1P35558 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCK1P35558 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCK1P35558 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PCK1P35558 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.43■□□□□ 0.86
PCK1P35558 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 AC005332.7-201ENST00000614046 2005 ntBASIC20.43■□□□□ 0.86
PCK1P35558 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PCK1P35558 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.43■□□□□ 0.86
PCK1P35558 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.43■□□□□ 0.86
PCK1P35558 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.43■□□□□ 0.86
PCK1P35558 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
PCK1P35558 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.43■□□□□ 0.86
PCK1P35558 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
PCK1P35558 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.43■□□□□ 0.86
PCK1P35558 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCK1P35558 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
PCK1P35558 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.42■□□□□ 0.86
PCK1P35558 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCK1P35558 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.42■□□□□ 0.86
PCK1P35558 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.42■□□□□ 0.86
PCK1P35558 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.42■□□□□ 0.86
PCK1P35558 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.42■□□□□ 0.86
PCK1P35558 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.42■□□□□ 0.86
PCK1P35558 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.42■□□□□ 0.86
PCK1P35558 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.42■□□□□ 0.86
PCK1P35558 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms