Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
RPA3P35244 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.65■□□□□ 0.74
RPA3P35244 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.65■□□□□ 0.74
RPA3P35244 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RPA3P35244 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RPA3P35244 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.65■□□□□ 0.74
RPA3P35244 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.65■□□□□ 0.74
RPA3P35244 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPA3P35244 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
RPA3P35244 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RPA3P35244 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RPA3P35244 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.64■□□□□ 0.73
RPA3P35244 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 AL031963.3-201ENST00000606441 850 ntBASIC19.64■□□□□ 0.73
RPA3P35244 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.64■□□□□ 0.73
RPA3P35244 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.64■□□□□ 0.73
RPA3P35244 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.64■□□□□ 0.73
RPA3P35244 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 LETM1P2-201ENST00000597330 2178 ntBASIC19.64■□□□□ 0.73
RPA3P35244 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPA3P35244 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.64■□□□□ 0.73
RPA3P35244 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RPA3P35244 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RPA3P35244 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 AC104581.1-202ENST00000635932 2618 ntBASIC19.63■□□□□ 0.73
RPA3P35244 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 AL049812.1-201ENST00000432563 2267 ntBASIC19.63■□□□□ 0.73
RPA3P35244 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RPA3P35244 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPA3P35244 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.63■□□□□ 0.73
RPA3P35244 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RPA3P35244 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.63■□□□□ 0.73
RPA3P35244 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.63■□□□□ 0.73
RPA3P35244 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 MIR4758-201ENST00000577688 71 ntBASIC19.63■□□□□ 0.73
RPA3P35244 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPA3P35244 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.63■□□□□ 0.73
RPA3P35244 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPA3P35244 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.63■□□□□ 0.73
RPA3P35244 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPA3P35244 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPA3P35244 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPA3P35244 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
RPA3P35244 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.62■□□□□ 0.73
RPA3P35244 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.62■□□□□ 0.73
RPA3P35244 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RPA3P35244 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.62■□□□□ 0.73
RPA3P35244 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.62■□□□□ 0.73
RPA3P35244 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.62■□□□□ 0.73
RPA3P35244 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RPA3P35244 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.62■□□□□ 0.73
RPA3P35244 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPA3P35244 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms