Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.54■□□□□ 0.88
CTNNA1P35221 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTNNA1P35221 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNNA1P35221 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CTNNA1P35221 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTNNA1P35221 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 MKRN4P-201ENST00000444706 1521 ntBASIC20.53■□□□□ 0.88
CTNNA1P35221 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CTNNA1P35221 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.53■□□□□ 0.88
CTNNA1P35221 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNNA1P35221 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.53■□□□□ 0.88
CTNNA1P35221 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.53■□□□□ 0.88
CTNNA1P35221 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 AC080038.1-201ENST00000611274 1154 ntBASIC20.53■□□□□ 0.88
CTNNA1P35221 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.53■□□□□ 0.88
CTNNA1P35221 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTNNA1P35221 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
CTNNA1P35221 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTNNA1P35221 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTNNA1P35221 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTNNA1P35221 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CTNNA1P35221 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CTNNA1P35221 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CTNNA1P35221 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CTNNA1P35221 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.52■□□□□ 0.88
CTNNA1P35221 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTNNA1P35221 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNNA1P35221 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNNA1P35221 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNNA1P35221 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTNNA1P35221 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CTNNA1P35221 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNNA1P35221 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNNA1P35221 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 CDCA4P2-201ENST00000441182 718 ntBASIC20.51■□□□□ 0.87
CTNNA1P35221 AF201337.1-201ENST00000520239 748 ntBASIC20.51■□□□□ 0.87
CTNNA1P35221 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNNA1P35221 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNNA1P35221 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CTNNA1P35221 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.51■□□□□ 0.87
CTNNA1P35221 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 LINC01465-201ENST00000408887 1940 ntBASIC20.51■□□□□ 0.87
CTNNA1P35221 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CTNNA1P35221 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTNNA1P35221 AC026471.1-201ENST00000564629 3026 ntBASIC20.51■□□□□ 0.87
CTNNA1P35221 TFP1-202ENST00000475455 1573 ntBASIC20.51■□□□□ 0.87
CTNNA1P35221 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.51■□□□□ 0.87
CTNNA1P35221 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CTNNA1P35221 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 AC020763.4-201ENST00000623414 4170 ntBASIC20.5■□□□□ 0.87
CTNNA1P35221 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.5■□□□□ 0.87
CTNNA1P35221 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.5■□□□□ 0.87
CTNNA1P35221 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.5■□□□□ 0.87
CTNNA1P35221 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.5■□□□□ 0.87
CTNNA1P35221 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.5■□□□□ 0.87
CTNNA1P35221 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CTNNA1P35221 AC105036.2-201ENST00000569468 176 ntBASIC20.5■□□□□ 0.87
CTNNA1P35221 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTNNA1P35221 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.5■□□□□ 0.87
CTNNA1P35221 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms