Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.31■■□□□ 1
HOXC8P31273 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.31■■□□□ 1
HOXC8P31273 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.31■■□□□ 1
HOXC8P31273 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.31■■□□□ 1
HOXC8P31273 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 PRSS44-201ENST00000515154 1146 ntBASIC21.31■■□□□ 1
HOXC8P31273 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.31■■□□□ 1
HOXC8P31273 AP003041.3-201ENST00000527151 707 ntBASIC21.31■■□□□ 1
HOXC8P31273 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
HOXC8P31273 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.31■■□□□ 1
HOXC8P31273 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC8P31273 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC8P31273 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.3■■□□□ 1
HOXC8P31273 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.3■■□□□ 1
HOXC8P31273 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
HOXC8P31273 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.3■■□□□ 1
HOXC8P31273 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.3■■□□□ 1
HOXC8P31273 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC8P31273 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC8P31273 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.3■■□□□ 1
HOXC8P31273 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC8P31273 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.3■■□□□ 1
HOXC8P31273 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.3■■□□□ 1
HOXC8P31273 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.3■■□□□ 1
HOXC8P31273 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.3■■□□□ 1
HOXC8P31273 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.3■■□□□ 1
HOXC8P31273 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.3■■□□□ 1
HOXC8P31273 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.3■■□□□ 1
HOXC8P31273 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.3■■□□□ 1
HOXC8P31273 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.3■■□□□ 1
HOXC8P31273 AL358472.4-201ENST00000633140 710 ntBASIC21.3■■□□□ 1
HOXC8P31273 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC8P31273 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC8P31273 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC8P31273 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HOXC8P31273 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.29■■□□□ 1
HOXC8P31273 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.29■■□□□ 1
HOXC8P31273 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.29■■□□□ 1
HOXC8P31273 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HOXC8P31273 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.29■■□□□ 1
HOXC8P31273 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HOXC8P31273 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.29■■□□□ 1
HOXC8P31273 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.29■■□□□ 1
HOXC8P31273 AC091076.1-201ENST00000610741 619 ntBASIC21.29■■□□□ 1
HOXC8P31273 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC8P31273 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.29■■□□□ 1
HOXC8P31273 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HOXC8P31273 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HOXC8P31273 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.28■■□□□ 1
HOXC8P31273 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.28■■□□□ 1
HOXC8P31273 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.28■■□□□ 1
HOXC8P31273 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.28■■□□□ 1
HOXC8P31273 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.28■■□□□ 1
HOXC8P31273 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.28■■□□□ 1
HOXC8P31273 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.28■■□□□ 1
HOXC8P31273 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.28■■□□□ 1
HOXC8P31273 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 AL031432.5-201ENST00000641059 760 ntBASIC21.28■■□□□ 1
HOXC8P31273 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HOXC8P31273 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.28■■□□□ 1
HOXC8P31273 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.28■■□□□ 1
HOXC8P31273 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HOXC8P31273 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.27■■□□□ 1
HOXC8P31273 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HOXC8P31273 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.27■■□□□ 1
HOXC8P31273 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.27■■□□□ 1
HOXC8P31273 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC8P31273 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.27■■□□□ 1
HOXC8P31273 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.27■■□□□ 1
HOXC8P31273 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC8P31273 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC8P31273 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.27■■□□□ 1
HOXC8P31273 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.27■■□□□ 1
HOXC8P31273 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC8P31273 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC8P31273 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
HOXC8P31273 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms