Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SHC1P29353 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC1P29353 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC1P29353 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC1P29353 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC1P29353 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.82■□□□□ 0.44
SHC1P29353 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 MTDHP1-201ENST00000605323 784 ntBASIC17.82■□□□□ 0.44
SHC1P29353 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SHC1P29353 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC1P29353 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SHC1P29353 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC1P29353 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SHC1P29353 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.81■□□□□ 0.44
SHC1P29353 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.81■□□□□ 0.44
SHC1P29353 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
SHC1P29353 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC1P29353 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.81■□□□□ 0.44
SHC1P29353 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHC1P29353 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC1P29353 AC005332.7-201ENST00000614046 2005 ntBASIC17.81■□□□□ 0.44
SHC1P29353 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SHC1P29353 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.8■□□□□ 0.44
SHC1P29353 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.8■□□□□ 0.44
SHC1P29353 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SHC1P29353 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 AC098590.1-201ENST00000468126 897 ntBASIC17.8■□□□□ 0.44
SHC1P29353 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHC1P29353 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.8■□□□□ 0.44
SHC1P29353 AL121906.2-201ENST00000621597 723 ntBASIC17.8■□□□□ 0.44
SHC1P29353 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SHC1P29353 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.8■□□□□ 0.44
SHC1P29353 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SHC1P29353 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHC1P29353 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.8■□□□□ 0.44
SHC1P29353 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC1P29353 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC1P29353 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC1P29353 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC1P29353 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC1P29353 RN7SL471P-201ENST00000580476 299 ntBASIC17.79■□□□□ 0.44
SHC1P29353 AL121829.2-201ENST00000620908 328 ntBASIC17.79■□□□□ 0.44
SHC1P29353 AL023875.1-201ENST00000640777 796 ntBASIC17.79■□□□□ 0.44
SHC1P29353 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.79■□□□□ 0.44
SHC1P29353 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.79■□□□□ 0.44
SHC1P29353 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.79■□□□□ 0.44
SHC1P29353 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC1P29353 TFP1-202ENST00000475455 1573 ntBASIC17.79■□□□□ 0.44
SHC1P29353 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHC1P29353 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.78■□□□□ 0.44
SHC1P29353 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
SHC1P29353 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC1P29353 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms