Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EPHA3P29320 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EPHA3P29320 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
EPHA3P29320 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHA3P29320 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
EPHA3P29320 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 AC009113.1-201ENST00000570267 2443 ntBASIC18.92■□□□□ 0.62
EPHA3P29320 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 AC018553.1-201ENST00000616682 1458 ntBASIC18.92■□□□□ 0.62
EPHA3P29320 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHA3P29320 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHA3P29320 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
EPHA3P29320 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
EPHA3P29320 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHA3P29320 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 DUX4L16-201ENST00000555130 1264 ntBASIC18.92■□□□□ 0.62
EPHA3P29320 AC137761.2-201ENST00000561729 223 ntBASIC18.92■□□□□ 0.62
EPHA3P29320 AC145350.3-201ENST00000569033 163 ntBASIC18.92■□□□□ 0.62
EPHA3P29320 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHA3P29320 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHA3P29320 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.92■□□□□ 0.62
EPHA3P29320 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.92■□□□□ 0.62
EPHA3P29320 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
EPHA3P29320 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
EPHA3P29320 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 AC141586.3-201ENST00000562166 1838 ntBASIC18.92■□□□□ 0.62
EPHA3P29320 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHA3P29320 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.92■□□□□ 0.62
EPHA3P29320 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EPHA3P29320 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.91■□□□□ 0.62
EPHA3P29320 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.91■□□□□ 0.62
EPHA3P29320 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHA3P29320 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.91■□□□□ 0.62
EPHA3P29320 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
EPHA3P29320 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.91■□□□□ 0.62
EPHA3P29320 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.91■□□□□ 0.62
EPHA3P29320 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
EPHA3P29320 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.91■□□□□ 0.62
EPHA3P29320 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EPHA3P29320 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
EPHA3P29320 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHA3P29320 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
EPHA3P29320 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA3P29320 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
EPHA3P29320 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.9■□□□□ 0.62
EPHA3P29320 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHA3P29320 AC034268.1-201ENST00000441047 882 ntBASIC18.9■□□□□ 0.62
EPHA3P29320 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
EPHA3P29320 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.9■□□□□ 0.62
EPHA3P29320 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA3P29320 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHA3P29320 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
EPHA3P29320 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA3P29320 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
EPHA3P29320 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms