Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.62■□□□□ 0.57
HTR1EP28566 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HTR1EP28566 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1EP28566 AL031963.3-201ENST00000606441 850 ntBASIC18.62■□□□□ 0.57
HTR1EP28566 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
HTR1EP28566 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR1EP28566 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR1EP28566 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HTR1EP28566 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1EP28566 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HTR1EP28566 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR1EP28566 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HTR1EP28566 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.61■□□□□ 0.57
HTR1EP28566 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR1EP28566 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1EP28566 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HTR1EP28566 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR1EP28566 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.61■□□□□ 0.57
HTR1EP28566 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.61■□□□□ 0.57
HTR1EP28566 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1EP28566 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR1EP28566 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR1EP28566 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1EP28566 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1EP28566 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HTR1EP28566 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1EP28566 AC026366.1-201ENST00000488803 879 ntBASIC18.6■□□□□ 0.57
HTR1EP28566 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.6■□□□□ 0.57
HTR1EP28566 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.6■□□□□ 0.57
HTR1EP28566 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.6■□□□□ 0.57
HTR1EP28566 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HTR1EP28566 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HTR1EP28566 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HTR1EP28566 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR1EP28566 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
HTR1EP28566 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.59■□□□□ 0.57
HTR1EP28566 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 KRT8P20-201ENST00000423953 1409 ntBASIC18.59■□□□□ 0.57
HTR1EP28566 AC010980.2-201ENST00000587099 1412 ntBASIC18.59■□□□□ 0.57
HTR1EP28566 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HTR1EP28566 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.59■□□□□ 0.57
HTR1EP28566 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.59■□□□□ 0.57
HTR1EP28566 AC073648.6-201ENST00000641589 218 ntBASIC18.59■□□□□ 0.57
HTR1EP28566 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.59■□□□□ 0.57
HTR1EP28566 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HTR1EP28566 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR1EP28566 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HTR1EP28566 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms