Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 AC239809.2-201ENST00000415381 517 ntBASIC19.65■□□□□ 0.74
HLA-DPA1P20036 FAM201B-201ENST00000458407 597 ntBASIC19.65■□□□□ 0.74
HLA-DPA1P20036 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
HLA-DPA1P20036 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 AC128676.1-201ENST00000454392 318 ntBASIC19.64■□□□□ 0.73
HLA-DPA1P20036 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 RN7SL471P-201ENST00000580476 299 ntBASIC19.64■□□□□ 0.73
HLA-DPA1P20036 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 AC004264.1-201ENST00000608354 794 ntBASIC19.64■□□□□ 0.73
HLA-DPA1P20036 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPA1P20036 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 AL023875.1-201ENST00000640777 796 ntBASIC19.63■□□□□ 0.73
HLA-DPA1P20036 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPA1P20036 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 AC093484.2-201ENST00000580996 2166 ntBASIC19.62■□□□□ 0.73
HLA-DPA1P20036 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DPA1P20036 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms