Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CXCL3P19876 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL3P19876 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL3P19876 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL3P19876 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.34■□□□□ 0.21
CXCL3P19876 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.34■□□□□ 0.21
CXCL3P19876 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL3P19876 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL3P19876 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL3P19876 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL3P19876 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL3P19876 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL3P19876 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL3P19876 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL3P19876 TEX21P-204ENST00000641479 1693 ntBASIC16.34■□□□□ 0.21
CXCL3P19876 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CXCL3P19876 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.33■□□□□ 0.21
CXCL3P19876 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL3P19876 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.33■□□□□ 0.21
CXCL3P19876 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL3P19876 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL3P19876 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL3P19876 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL3P19876 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.33■□□□□ 0.2
CXCL3P19876 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL3P19876 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL3P19876 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL3P19876 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL3P19876 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CXCL3P19876 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL3P19876 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL3P19876 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CXCL3P19876 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 ESPNP-201ENST00000270691 2015 ntBASIC16.33■□□□□ 0.2
CXCL3P19876 AC008764.6-201ENST00000595909 2069 ntBASIC16.33■□□□□ 0.2
CXCL3P19876 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL3P19876 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL3P19876 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL3P19876 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CXCL3P19876 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CXCL3P19876 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCL3P19876 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCL3P19876 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.32■□□□□ 0.2
CXCL3P19876 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CXCL3P19876 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CXCL3P19876 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
CXCL3P19876 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL3P19876 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL3P19876 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL3P19876 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL3P19876 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
CXCL3P19876 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL3P19876 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CXCL3P19876 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL3P19876 AC084018.2-201ENST00000613093 2607 ntBASIC16.31■□□□□ 0.2
CXCL3P19876 SRD5A1P1-201ENST00000442297 786 ntBASIC16.31■□□□□ 0.2
CXCL3P19876 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.31■□□□□ 0.2
CXCL3P19876 AC092171.4-201ENST00000609130 632 ntBASIC16.31■□□□□ 0.2
CXCL3P19876 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.31■□□□□ 0.2
CXCL3P19876 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CXCL3P19876 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL3P19876 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CXCL3P19876 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL3P19876 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms