Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 TMEM179-206ENST00000616017 1645 ntBASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 AC005521.1-201ENST00000393351 872 ntBASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB40ALP0C0E4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 AP001271.2-201ENST00000624018 1556 ntBASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 AC097488.1-201ENST00000507834 756 ntBASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 AC130371.2-201ENST00000619443 611 ntBASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 HLA-A-209ENST00000638375 975 ntBASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40ALP0C0E4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40ALP0C0E4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 EGLN1P1-201ENST00000531623 762 ntBASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 AP000692.2-201ENST00000608391 879 ntBASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40ALP0C0E4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms