Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP2P08253 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP2P08253 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP2P08253 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.63■□□□□ 0.73
MMP2P08253 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.63■□□□□ 0.73
MMP2P08253 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
MMP2P08253 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP2P08253 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP2P08253 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MMP2P08253 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
MMP2P08253 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MMP2P08253 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP2P08253 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP2P08253 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP2P08253 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.62■□□□□ 0.73
MMP2P08253 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MMP2P08253 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP2P08253 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.62■□□□□ 0.73
MMP2P08253 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP2P08253 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP2P08253 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.62■□□□□ 0.73
MMP2P08253 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 FAM197Y4-202ENST00000622692 608 ntBASIC19.62■□□□□ 0.73
MMP2P08253 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 TMEM191A-211ENST00000637163 1067 ntBASIC19.62■□□□□ 0.73
MMP2P08253 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP2P08253 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP2P08253 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP2P08253 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP2P08253 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MMP2P08253 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 SDHAP1-207ENST00000440850 2000 ntBASIC19.61■□□□□ 0.73
MMP2P08253 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
MMP2P08253 AL158047.1-201ENST00000445918 881 ntBASIC19.61■□□□□ 0.73
MMP2P08253 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.61■□□□□ 0.73
MMP2P08253 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP2P08253 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.61■□□□□ 0.73
MMP2P08253 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP2P08253 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP2P08253 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.61■□□□□ 0.73
MMP2P08253 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP2P08253 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MMP2P08253 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP2P08253 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP2P08253 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 AL032819.2-201ENST00000624543 2162 ntBASIC19.6■□□□□ 0.73
MMP2P08253 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 HTR7P1-201ENST00000538670 1336 ntBASIC19.6■□□□□ 0.73
MMP2P08253 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.6■□□□□ 0.73
MMP2P08253 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP2P08253 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.6■□□□□ 0.73
MMP2P08253 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MMP2P08253 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP2P08253 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms