Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
IFNA1P01562 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IFNA1P01562 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
IFNA1P01562 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.41■□□□□ 0.06
IFNA1P01562 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.41■□□□□ 0.06
IFNA1P01562 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.41■□□□□ 0.06
IFNA1P01562 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
IFNA1P01562 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.41■□□□□ 0.06
IFNA1P01562 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IFNA1P01562 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IFNA1P01562 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFNA1P01562 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.41■□□□□ 0.06
IFNA1P01562 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.41■□□□□ 0.06
IFNA1P01562 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.41■□□□□ 0.06
IFNA1P01562 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.4■□□□□ 0.06
IFNA1P01562 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IFNA1P01562 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.4■□□□□ 0.06
IFNA1P01562 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 WIZP1-201ENST00000531444 2299 ntBASIC15.4■□□□□ 0.06
IFNA1P01562 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.4■□□□□ 0.06
IFNA1P01562 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.4■□□□□ 0.06
IFNA1P01562 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.4■□□□□ 0.06
IFNA1P01562 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.4■□□□□ 0.06
IFNA1P01562 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 AC012354.3-201ENST00000623734 483 ntBASIC15.4■□□□□ 0.06
IFNA1P01562 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
IFNA1P01562 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.4■□□□□ 0.06
IFNA1P01562 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.4■□□□□ 0.06
IFNA1P01562 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.4■□□□□ 0.06
IFNA1P01562 AL354751.1-201ENST00000412768 1863 ntBASIC15.4■□□□□ 0.06
IFNA1P01562 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFNA1P01562 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.39■□□□□ 0.05
IFNA1P01562 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
IFNA1P01562 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 AC006333.2-201ENST00000607957 2099 ntBASIC15.39■□□□□ 0.05
IFNA1P01562 MKRN4P-201ENST00000444706 1521 ntBASIC15.39■□□□□ 0.05
IFNA1P01562 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
IFNA1P01562 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.39■□□□□ 0.05
IFNA1P01562 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
IFNA1P01562 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.39■□□□□ 0.05
IFNA1P01562 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.39■□□□□ 0.05
IFNA1P01562 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IFNA1P01562 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
IFNA1P01562 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
IFNA1P01562 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IFNA1P01562 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms