Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFP01375 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFP01375 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TNFP01375 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFP01375 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFP01375 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TNFP01375 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFP01375 AC005521.1-201ENST00000393351 872 ntBASIC19.02■□□□□ 0.64
TNFP01375 AC128688.1-201ENST00000487626 519 ntBASIC19.02■□□□□ 0.64
TNFP01375 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFP01375 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.02■□□□□ 0.64
TNFP01375 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TNFP01375 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFP01375 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFP01375 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFP01375 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TNFP01375 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFP01375 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.02■□□□□ 0.63
TNFP01375 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFP01375 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFP01375 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFP01375 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFP01375 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 TSPY14P-201ENST00000303979 915 ntBASIC19.01■□□□□ 0.63
TNFP01375 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 AL137013.1-201ENST00000432946 1228 ntBASIC19.01■□□□□ 0.63
TNFP01375 MFAP1P1-201ENST00000442257 1255 ntBASIC19.01■□□□□ 0.63
TNFP01375 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.01■□□□□ 0.63
TNFP01375 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFP01375 RN7SL850P-201ENST00000579959 291 ntBASIC19.01■□□□□ 0.63
TNFP01375 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFP01375 AC092865.7-201ENST00000641832 219 ntBASIC19.01■□□□□ 0.63
TNFP01375 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFP01375 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFP01375 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TNFP01375 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFP01375 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19■□□□□ 0.63
TNFP01375 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFP01375 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19■□□□□ 0.63
TNFP01375 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFP01375 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFP01375 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNFP01375 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19■□□□□ 0.63
TNFP01375 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19■□□□□ 0.63
TNFP01375 AC113347.1-201ENST00000413321 391 ntBASIC19■□□□□ 0.63
TNFP01375 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TNFP01375 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19■□□□□ 0.63
TNFP01375 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19■□□□□ 0.63
TNFP01375 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFP01375 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19■□□□□ 0.63
TNFP01375 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19■□□□□ 0.63
TNFP01375 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19■□□□□ 0.63
TNFP01375 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19■□□□□ 0.63
TNFP01375 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNFP01375 LINC01006-201ENST00000333319 2292 ntBASIC19■□□□□ 0.63
TNFP01375 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TNFP01375 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19■□□□□ 0.63
TNFP01375 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TNFP01375 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNFP01375 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TNFP01375 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.99■□□□□ 0.63
TNFP01375 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFP01375 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TNFP01375 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.99■□□□□ 0.63
TNFP01375 SLC25A3P1-201ENST00000443844 931 ntBASIC18.99■□□□□ 0.63
TNFP01375 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFP01375 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.99■□□□□ 0.63
TNFP01375 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TNFP01375 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TNFP01375 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TNFP01375 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFP01375 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFP01375 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFP01375 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms