Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.99■□□□□ 0.31
UPK1BO75841 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
UPK1BO75841 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.99■□□□□ 0.31
UPK1BO75841 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.99■□□□□ 0.31
UPK1BO75841 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.99■□□□□ 0.31
UPK1BO75841 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.99■□□□□ 0.31
UPK1BO75841 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.98■□□□□ 0.31
UPK1BO75841 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
UPK1BO75841 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.98■□□□□ 0.31
UPK1BO75841 AC103724.3-201ENST00000564481 992 ntBASIC16.98■□□□□ 0.31
UPK1BO75841 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.98■□□□□ 0.31
UPK1BO75841 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.98■□□□□ 0.31
UPK1BO75841 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
UPK1BO75841 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
UPK1BO75841 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UPK1BO75841 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.98■□□□□ 0.31
UPK1BO75841 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1BO75841 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UPK1BO75841 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
UPK1BO75841 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UPK1BO75841 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.97■□□□□ 0.31
UPK1BO75841 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.97■□□□□ 0.31
UPK1BO75841 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.97■□□□□ 0.31
UPK1BO75841 AL033527.3-201ENST00000566366 1196 ntBASIC16.97■□□□□ 0.31
UPK1BO75841 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UPK1BO75841 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UPK1BO75841 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.97■□□□□ 0.31
UPK1BO75841 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.97■□□□□ 0.31
UPK1BO75841 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1BO75841 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
UPK1BO75841 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.96■□□□□ 0.31
UPK1BO75841 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
UPK1BO75841 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UPK1BO75841 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UPK1BO75841 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
UPK1BO75841 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.96■□□□□ 0.31
UPK1BO75841 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 AP001271.2-201ENST00000624018 1556 ntBASIC16.96■□□□□ 0.31
UPK1BO75841 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UPK1BO75841 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.96■□□□□ 0.31
UPK1BO75841 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1BO75841 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms