Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP200O75643 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP200O75643 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP200O75643 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP200O75643 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP200O75643 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP200O75643 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP200O75643 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SNRNP200O75643 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNRNP200O75643 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.65■□□□□ 0.58
SNRNP200O75643 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.65■□□□□ 0.58
SNRNP200O75643 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.65■□□□□ 0.58
SNRNP200O75643 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP200O75643 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP200O75643 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP200O75643 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.65■□□□□ 0.58
SNRNP200O75643 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.65■□□□□ 0.58
SNRNP200O75643 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.65■□□□□ 0.58
SNRNP200O75643 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.65■□□□□ 0.58
SNRNP200O75643 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.65■□□□□ 0.58
SNRNP200O75643 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNRNP200O75643 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.65■□□□□ 0.58
SNRNP200O75643 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SNRNP200O75643 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNRNP200O75643 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNRNP200O75643 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.64■□□□□ 0.57
SNRNP200O75643 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRNP200O75643 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRNP200O75643 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.64■□□□□ 0.57
SNRNP200O75643 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRNP200O75643 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.64■□□□□ 0.57
SNRNP200O75643 AP001412.1-201ENST00000608405 714 ntBASIC18.64■□□□□ 0.57
SNRNP200O75643 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRNP200O75643 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SNRNP200O75643 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRNP200O75643 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
SNRNP200O75643 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.64■□□□□ 0.57
SNRNP200O75643 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.64■□□□□ 0.57
SNRNP200O75643 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNRNP200O75643 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.64■□□□□ 0.57
SNRNP200O75643 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.64■□□□□ 0.57
SNRNP200O75643 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.64■□□□□ 0.57
SNRNP200O75643 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SNRNP200O75643 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.63■□□□□ 0.57
SNRNP200O75643 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.63■□□□□ 0.57
SNRNP200O75643 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 TSPY15P-201ENST00000457163 923 ntBASIC18.63■□□□□ 0.57
SNRNP200O75643 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.63■□□□□ 0.57
SNRNP200O75643 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 MIR6786-201ENST00000616843 113 ntBASIC18.63■□□□□ 0.57
SNRNP200O75643 CR392000.1-201ENST00000624770 1228 ntBASIC18.63■□□□□ 0.57
SNRNP200O75643 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.63■□□□□ 0.57
SNRNP200O75643 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNRNP200O75643 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.62■□□□□ 0.57
SNRNP200O75643 SLC25A24-204ENST00000569674 2357 ntBASIC18.62■□□□□ 0.57
SNRNP200O75643 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.62■□□□□ 0.57
SNRNP200O75643 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 BX088651.1-201ENST00000540551 451 ntBASIC18.62■□□□□ 0.57
SNRNP200O75643 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.62■□□□□ 0.57
SNRNP200O75643 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.62■□□□□ 0.57
SNRNP200O75643 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.62■□□□□ 0.57
SNRNP200O75643 RCC2P6-201ENST00000526625 1557 ntBASIC18.62■□□□□ 0.57
SNRNP200O75643 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNRNP200O75643 AC079598.2-202ENST00000546624 1451 ntBASIC18.62■□□□□ 0.57
SNRNP200O75643 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms