Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM13O60858 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM13O60858 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM13O60858 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM13O60858 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM13O60858 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM13O60858 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 BID-214ENST00000617586 542 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM13O60858 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM13O60858 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
TRIM13O60858 TEX21P-204ENST00000641479 1693 ntBASIC19.14■□□□□ 0.66
TRIM13O60858 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TRIM13O60858 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
TRIM13O60858 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM13O60858 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM13O60858 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM13O60858 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM13O60858 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM13O60858 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIM13O60858 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM13O60858 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM13O60858 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM13O60858 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM13O60858 AL049812.1-201ENST00000432563 2267 ntBASIC19.14■□□□□ 0.65
TRIM13O60858 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM13O60858 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM13O60858 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM13O60858 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM13O60858 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM13O60858 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM13O60858 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM13O60858 AC006333.2-201ENST00000607957 2099 ntBASIC19.13■□□□□ 0.65
TRIM13O60858 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM13O60858 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM13O60858 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.13■□□□□ 0.65
TRIM13O60858 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM13O60858 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 TFP1-202ENST00000475455 1573 ntBASIC19.13■□□□□ 0.65
TRIM13O60858 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM13O60858 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM13O60858 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM13O60858 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM13O60858 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.13■□□□□ 0.65
TRIM13O60858 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM13O60858 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM13O60858 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM13O60858 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
TRIM13O60858 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM13O60858 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms