Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RRP8O43159 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.31■□□□□ 0.52
RRP8O43159 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.31■□□□□ 0.52
RRP8O43159 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 TFP1-202ENST00000475455 1573 ntBASIC18.31■□□□□ 0.52
RRP8O43159 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RRP8O43159 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RRP8O43159 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 ATP5G2P1-201ENST00000433580 426 ntBASIC18.31■□□□□ 0.52
RRP8O43159 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.31■□□□□ 0.52
RRP8O43159 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.31■□□□□ 0.52
RRP8O43159 ZNF444P1-201ENST00000559497 298 ntBASIC18.31■□□□□ 0.52
RRP8O43159 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.31■□□□□ 0.52
RRP8O43159 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.31■□□□□ 0.52
RRP8O43159 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RRP8O43159 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.3■□□□□ 0.52
RRP8O43159 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 AC004870.1-201ENST00000315132 882 ntBASIC18.3■□□□□ 0.52
RRP8O43159 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.3■□□□□ 0.52
RRP8O43159 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.3■□□□□ 0.52
RRP8O43159 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.3■□□□□ 0.52
RRP8O43159 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 MIR3652-201ENST00000579335 131 ntBASIC18.3■□□□□ 0.52
RRP8O43159 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.3■□□□□ 0.52
RRP8O43159 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.3■□□□□ 0.52
RRP8O43159 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
RRP8O43159 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.3■□□□□ 0.52
RRP8O43159 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RRP8O43159 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RRP8O43159 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RRP8O43159 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RRP8O43159 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 AC244015.2-201ENST00000616358 1861 ntBASIC18.29■□□□□ 0.52
RRP8O43159 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.29■□□□□ 0.52
RRP8O43159 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.29■□□□□ 0.52
RRP8O43159 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.29■□□□□ 0.52
RRP8O43159 AC246785.2-201ENST00000432512 513 ntBASIC18.29■□□□□ 0.52
RRP8O43159 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.29■□□□□ 0.52
RRP8O43159 CA15P1-201ENST00000481698 905 ntBASIC18.29■□□□□ 0.52
RRP8O43159 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.29■□□□□ 0.52
RRP8O43159 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.29■□□□□ 0.52
RRP8O43159 KRT16P6-202ENST00000425692 1426 ntBASIC18.29■□□□□ 0.52
RRP8O43159 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.29■□□□□ 0.52
RRP8O43159 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
RRP8O43159 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.29■□□□□ 0.52
RRP8O43159 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RRP8O43159 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
RRP8O43159 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RRP8O43159 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RRP8O43159 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RRP8O43159 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.28■□□□□ 0.52
RRP8O43159 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RRP8O43159 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RRP8O43159 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.28■□□□□ 0.52
RRP8O43159 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.28■□□□□ 0.52
RRP8O43159 AC112907.2-201ENST00000448639 330 ntBASIC18.28■□□□□ 0.52
RRP8O43159 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.28■□□□□ 0.52
RRP8O43159 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.28■□□□□ 0.52
RRP8O43159 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RRP8O43159 AC111152.3-201ENST00000569699 673 ntBASIC18.28■□□□□ 0.52
RRP8O43159 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.28■□□□□ 0.52
RRP8O43159 RN7SL510P-201ENST00000581311 263 ntBASIC18.28■□□□□ 0.52
RRP8O43159 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.28■□□□□ 0.52
RRP8O43159 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 HLA-A-209ENST00000638375 975 ntBASIC18.28■□□□□ 0.52
RRP8O43159 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RRP8O43159 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms