Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 AC073648.2-201ENST00000510116 352 ntBASIC20.79■□□□□ 0.92
SOX1O00570 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.79■□□□□ 0.92
SOX1O00570 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SOX1O00570 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.79■□□□□ 0.92
SOX1O00570 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.79■□□□□ 0.92
SOX1O00570 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX1O00570 AL162741.1-201ENST00000565563 1558 ntBASIC20.79■□□□□ 0.92
SOX1O00570 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SOX1O00570 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX1O00570 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SOX1O00570 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
SOX1O00570 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
SOX1O00570 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX1O00570 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX1O00570 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SOX1O00570 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX1O00570 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX1O00570 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX1O00570 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX1O00570 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX1O00570 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX1O00570 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX1O00570 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX1O00570 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX1O00570 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX1O00570 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SOX1O00570 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX1O00570 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SOX1O00570 AC018553.1-201ENST00000616682 1458 ntBASIC20.77■□□□□ 0.92
SOX1O00570 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SOX1O00570 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX1O00570 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
SOX1O00570 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX1O00570 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SOX1O00570 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SOX1O00570 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.77■□□□□ 0.92
SOX1O00570 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.77■□□□□ 0.92
SOX1O00570 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX1O00570 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX1O00570 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX1O00570 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.91
SOX1O00570 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SOX1O00570 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SOX1O00570 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.76■□□□□ 0.91
SOX1O00570 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SOX1O00570 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.76■□□□□ 0.91
SOX1O00570 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.76■□□□□ 0.91
SOX1O00570 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 AC093525.10-201ENST00000625130 1569 ntBASIC20.76■□□□□ 0.91
SOX1O00570 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX1O00570 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SOX1O00570 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 AC127496.7-201ENST00000625110 1798 ntBASIC20.75■□□□□ 0.91
SOX1O00570 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.75■□□□□ 0.91
SOX1O00570 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.75■□□□□ 0.91
SOX1O00570 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SOX1O00570 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SOX1O00570 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
SOX1O00570 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
SOX1O00570 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.74■□□□□ 0.91
SOX1O00570 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.74■□□□□ 0.91
SOX1O00570 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SOX1O00570 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SOX1O00570 TSPY22P-201ENST00000427496 604 ntBASIC20.74■□□□□ 0.91
SOX1O00570 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.74■□□□□ 0.91
SOX1O00570 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.74■□□□□ 0.91
SOX1O00570 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms