Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.61■□□□□ 0.09
UPK2O00526 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
UPK2O00526 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK2O00526 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK2O00526 RPS2P52-201ENST00000469610 820 ntBASIC15.61■□□□□ 0.09
UPK2O00526 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
UPK2O00526 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.61■□□□□ 0.09
UPK2O00526 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.61■□□□□ 0.09
UPK2O00526 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
UPK2O00526 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK2O00526 ZNF815P-204ENST00000434898 1737 ntBASIC15.6■□□□□ 0.09
UPK2O00526 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 SLC29A4P1-201ENST00000398760 971 ntBASIC15.6■□□□□ 0.09
UPK2O00526 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
UPK2O00526 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.6■□□□□ 0.09
UPK2O00526 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.6■□□□□ 0.09
UPK2O00526 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
UPK2O00526 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.6■□□□□ 0.09
UPK2O00526 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK2O00526 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK2O00526 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
UPK2O00526 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
UPK2O00526 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.6■□□□□ 0.09
UPK2O00526 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
UPK2O00526 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
UPK2O00526 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
UPK2O00526 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
UPK2O00526 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
UPK2O00526 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK2O00526 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.59■□□□□ 0.09
UPK2O00526 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK2O00526 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.59■□□□□ 0.09
UPK2O00526 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
UPK2O00526 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 AC124283.5-201ENST00000624661 1809 ntBASIC15.59■□□□□ 0.09
UPK2O00526 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK2O00526 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK2O00526 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
UPK2O00526 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
UPK2O00526 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
UPK2O00526 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UPK2O00526 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.58■□□□□ 0.09
UPK2O00526 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.58■□□□□ 0.09
UPK2O00526 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UPK2O00526 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
UPK2O00526 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UPK2O00526 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.58■□□□□ 0.08
UPK2O00526 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms