Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TAF4O00268 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TAF4O00268 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TAF4O00268 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
TAF4O00268 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.03■□□□□ 0.64
TAF4O00268 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TAF4O00268 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TAF4O00268 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 AC116050.2-201ENST00000612102 1779 ntBASIC19.02■□□□□ 0.64
TAF4O00268 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.02■□□□□ 0.64
TAF4O00268 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.02■□□□□ 0.64
TAF4O00268 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.02■□□□□ 0.64
TAF4O00268 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.02■□□□□ 0.64
TAF4O00268 LINC01238-205ENST00000567549 1107 ntBASIC19.02■□□□□ 0.64
TAF4O00268 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.02■□□□□ 0.64
TAF4O00268 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.02■□□□□ 0.64
TAF4O00268 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.02■□□□□ 0.64
TAF4O00268 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TAF4O00268 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.02■□□□□ 0.64
TAF4O00268 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.02■□□□□ 0.64
TAF4O00268 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.02■□□□□ 0.64
TAF4O00268 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TAF4O00268 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TAF4O00268 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TAF4O00268 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TAF4O00268 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.02■□□□□ 0.63
TAF4O00268 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TAF4O00268 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.02■□□□□ 0.63
TAF4O00268 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TAF4O00268 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.01■□□□□ 0.63
TAF4O00268 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TAF4O00268 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TAF4O00268 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.01■□□□□ 0.63
TAF4O00268 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.01■□□□□ 0.63
TAF4O00268 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.01■□□□□ 0.63
TAF4O00268 AC117947.1-201ENST00000427448 529 ntBASIC19.01■□□□□ 0.63
TAF4O00268 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.01■□□□□ 0.63
TAF4O00268 AC091390.4-202ENST00000476426 537 ntBASIC19.01■□□□□ 0.63
TAF4O00268 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.01■□□□□ 0.63
TAF4O00268 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TAF4O00268 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
TAF4O00268 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.01■□□□□ 0.63
TAF4O00268 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
TAF4O00268 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TAF4O00268 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TAF4O00268 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19■□□□□ 0.63
TAF4O00268 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 FAM8A6P-201ENST00000407496 1135 ntBASIC19■□□□□ 0.63
TAF4O00268 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19■□□□□ 0.63
TAF4O00268 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19■□□□□ 0.63
TAF4O00268 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19■□□□□ 0.63
TAF4O00268 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19■□□□□ 0.63
TAF4O00268 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
TAF4O00268 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19■□□□□ 0.63
TAF4O00268 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19■□□□□ 0.63
TAF4O00268 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
TAF4O00268 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19■□□□□ 0.63
TAF4O00268 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19■□□□□ 0.63
TAF4O00268 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19■□□□□ 0.63
TAF4O00268 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19■□□□□ 0.63
TAF4O00268 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.99■□□□□ 0.63
TAF4O00268 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TAF4O00268 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TAF4O00268 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TAF4O00268 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TAF4O00268 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.99■□□□□ 0.63
TAF4O00268 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.99■□□□□ 0.63
TAF4O00268 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.99■□□□□ 0.63
TAF4O00268 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TAF4O00268 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms