Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.67■□□□□ 0.1
SRRM4A7MD48 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.67■□□□□ 0.1
SRRM4A7MD48 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.67■□□□□ 0.1
SRRM4A7MD48 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 SOX15-203ENST00000570788 1093 ntBASIC15.66■□□□□ 0.1
SRRM4A7MD48 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SRRM4A7MD48 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SRRM4A7MD48 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 TNXA-203ENST00000507684 2038 ntBASIC15.65■□□□□ 0.1
SRRM4A7MD48 AP006587.1-201ENST00000534129 1502 ntBASIC15.65■□□□□ 0.1
SRRM4A7MD48 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 AL020996.1-203ENST00000536896 2307 ntBASIC15.65■□□□□ 0.1
SRRM4A7MD48 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 AL121906.2-201ENST00000621597 723 ntBASIC15.65■□□□□ 0.1
SRRM4A7MD48 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SRRM4A7MD48 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SRRM4A7MD48 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRRM4A7MD48 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SRRM4A7MD48 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.64■□□□□ 0.09
SRRM4A7MD48 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.64■□□□□ 0.09
SRRM4A7MD48 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms