Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 AC005224.4-201ENST00000583262 1652 ntBASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 SLC47A1P1-202ENST00000449666 945 ntBASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RBFOX3A6NFN3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 PKD1P1-201ENST00000458669 6805 ntBASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 ABALON-201ENST00000629058 1903 ntBASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.35■□□□□ 0.05
RBFOX3A6NFN3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 FP475955.4-201ENST00000623131 1990 ntBASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.34■□□□□ 0.05
RBFOX3A6NFN3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.33■□□□□ 0.05
RBFOX3A6NFN3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
RBFOX3A6NFN3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.33■□□□□ 0.05
RBFOX3A6NFN3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.33■□□□□ 0.05
RBFOX3A6NFN3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RBFOX3A6NFN3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RBFOX3A6NFN3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 MIR6724-1-201ENST00000616420 92 ntBASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 MIR6724-2-201ENST00000616483 92 ntBASIC15.33■□□□□ 0.04
RBFOX3A6NFN3 MIR6724-4-201ENST00000617390 92 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms