Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
TBC1D3FA6NER0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TBC1D3FA6NER0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
TBC1D3FA6NER0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TBC1D3FA6NER0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TBC1D3FA6NER0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 TSPY14P-201ENST00000303979 915 ntBASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 TERF1P1-201ENST00000311003 1181 ntBASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 ECEL1P2-202ENST00000465689 757 ntBASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 AL160286.2-201ENST00000567150 934 ntBASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D3FA6NER0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 AC092667.1-201ENST00000434301 2586 ntBASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 AC091390.4-202ENST00000476426 537 ntBASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D3FA6NER0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 AL162377.1-201ENST00000618844 1793 ntBASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 ATP5G1P1-201ENST00000448724 379 ntBASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D3FA6NER0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 Z85996.1-201ENST00000494644 937 ntBASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 AL445228.2-201ENST00000605589 952 ntBASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 AC009237.14-201ENST00000609975 1594 ntBASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TBC1D3FA6NER0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.35■□□□□ 0.69
TBC1D3FA6NER0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TBC1D3FA6NER0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms