Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 IRX1P1-201ENST00000438849 1838 ntBASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV6-1A0A0K0K1D8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms