Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 AL355355.2-201ENST00000442321 338 ntBASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 AC026471.5-201ENST00000615068 467 ntBASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 CR392000.1-201ENST00000624770 1228 ntBASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 KSR1P1-201ENST00000446298 240 ntBASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 AC009237.14-201ENST00000609975 1594 ntBASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 KRT16P1-201ENST00000399124 1418 ntBASIC14.07□□□□□ -0.16
IGHV4-28A0A0C4DH34 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 AC073130.3-201ENST00000624389 2278 ntBASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IGHV4-28A0A0C4DH34 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms