Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NOP56P2-201ENST00000447491 769 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC093890.1-201ENST00000502554 540 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 COX6B1P5-201ENST00000509843 249 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC006427.1-201ENST00000514359 712 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 RNU6-319P-201ENST00000516025 108 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 HMGB1P46-201ENST00000520062 610 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 OR7E128P-201ENST00000532736 1024 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 OSBPL9P3-201ENST00000534523 595 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 NOP56P3-201ENST00000549457 385 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC063949.1-201ENST00000552900 865 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 NMNAT1P1-201ENST00000554095 876 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 CD24P2-201ENST00000565486 219 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 MIR4330-201ENST00000579077 105 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC233702.9-201ENST00000581528 203 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC099654.8-201ENST00000637757 681 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 SDAD1P1-202ENST00000524156 2051 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF4Q92544 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC021242.1-201ENST00000507315 2035 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 AC007996.1-201ENST00000620414 2821 ntBASIC4.77□□□□□ -1.65
TM9SF4Q92544 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.77□□□□□ -1.65
TM9SF4Q92544 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TM9SF4Q92544 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 RN7SKP113-201ENST00000363891 295 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 RNA5SP90-201ENST00000364801 99 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 SNORA66-201ENST00000384792 133 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 RPL10P10-201ENST00000403509 664 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 Z86062.1-201ENST00000406773 777 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 RANP4-201ENST00000413361 655 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC011242.1-201ENST00000433596 1158 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 CEACAMP9-201ENST00000442990 513 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 AL606517.1-201ENST00000446914 387 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 SOX5P1-201ENST00000524155 1127 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 UBTFL9-201ENST00000534504 1148 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 RN7SL52P-201ENST00000584271 284 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC087283.1-201ENST00000604029 1074 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 RN7SL722P-201ENST00000617780 284 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 RN7SL565P-201ENST00000618246 284 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 AC091046.2-201ENST00000620775 665 ntBASIC4.76□□□□□ -1.65
TM9SF4Q92544 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TM9SF4Q92544 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF4Q92544 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.75□□□□□ -1.65
TM9SF4Q92544 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF4Q92544 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms