Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 RNA5SP394-201ENST00000364216 119 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 RN7SKP275-201ENST00000364626 301 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 RNU6-707P-201ENST00000364647 95 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 RNA5SP131-201ENST00000365452 119 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 OR7E156P-201ENST00000400303 464 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 CNOT7P1-201ENST00000429006 852 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 MTND5P25-201ENST00000430499 799 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 FAM96AP1-201ENST00000430879 482 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.46□□□□□ -1.54
PHGDHO43175 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 RPL21P6-201ENST00000479171 504 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 AC090114.3-201ENST00000479267 829 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.46□□□□□ -1.54
PHGDHO43175 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 AC010285.3-201ENST00000511668 676 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 AP005403.1-201ENST00000579720 229 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 MIR4666A-201ENST00000580160 79 ntBASIC5.46□□□□□ -1.54
PHGDHO43175 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.46□□□□□ -1.54
PHGDHO43175 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PHGDHO43175 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.46□□□□□ -1.54
PHGDHO43175 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PHGDHO43175 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.46□□□□□ -1.54
PHGDHO43175 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PHGDHO43175 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.45□□□□□ -1.54
PHGDHO43175 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.45□□□□□ -1.54
PHGDHO43175 TTC39DP-201ENST00000416781 1688 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 MIR375-201ENST00000362103 64 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 DYNLL1P7-201ENST00000429273 258 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 RPL7P4-203ENST00000430239 730 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 TXNP5-201ENST00000441043 315 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 FGF7P5-201ENST00000441829 291 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 EXTL2P1-201ENST00000446218 416 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 OR6K5P-201ENST00000447050 945 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 HMGB1P16-201ENST00000447155 540 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 AL358876.1-201ENST00000453364 1075 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 NECAP1P2-201ENST00000455668 727 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.45□□□□□ -1.54
PHGDHO43175 MTND2P14-201ENST00000482139 351 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.45□□□□□ -1.54
PHGDHO43175 AC005912.1-201ENST00000495392 255 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 IGBP1P4-201ENST00000503202 879 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 AC021193.1-201ENST00000511607 420 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 RNU6-615P-201ENST00000516065 106 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 RNU5A-4P-201ENST00000516588 111 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms