Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC018521.3-201ENST00000581213 816 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC005387.2-201ENST00000596596 440 ntTSL 3 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC00680-206ENST00000635948 181 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AL603764.2-201ENST00000636038 344 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 U6.99-201ENST00000637524 83 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC232271.1-201ENST00000602455 2715 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 MYBPC2-201ENST00000357701 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 KCNB2-201ENST00000523207 3582 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 BBS1-201ENST00000318312 3423 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 AC012360.3-201ENST00000610036 3449 ntBASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ZP4-202ENST00000611898 2474 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 PIK3CD-AS1-201ENST00000377320 1823 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 B4GALNT2-203ENST00000504681 1819 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ZBTB37-204ENST00000427304 2300 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 SYPL1-202ENST00000455385 2151 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF597-201ENST00000301744 5513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 XPO7-202ENST00000433566 4519 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 SYT2-201ENST00000367267 7614 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CHERP-201ENST00000198939 4084 ntTSL 5 BASIC5.18□□□□□ -1.58
KRTAP3-3Q9BYR6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 BHLHB9-204ENST00000448867 3936 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 FP565260.7-201ENST00000623998 3634 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 UHRF1-201ENST00000612630 4309 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF823-201ENST00000341191 2423 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 EBF3-202ENST00000368648 4375 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SHC4-201ENST00000332408 4558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 PCDHGB6-202ENST00000616430 4601 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 BOC-201ENST00000273395 4276 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 BOC-202ENST00000355385 4278 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 STX16-204ENST00000359617 4273 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC01460-201ENST00000379677 2860 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 OPRM1-202ENST00000330432 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 ENTHD1-201ENST00000325157 2710 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SNX15-201ENST00000352068 771 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 RNU6-944P-201ENST00000364023 107 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SETDB1-203ENST00000368963 1045 ntTSL 5 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AZIN2-202ENST00000373440 616 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SNORA1-201ENST00000384107 130 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 RNU6-1201P-201ENST00000384227 107 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SNORD116-13-201ENST00000384408 92 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 HM13-IT1-201ENST00000421894 356 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC00454-201ENST00000425483 503 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC01779-201ENST00000426515 914 ntTSL 3 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC018634.1-201ENST00000437554 401 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AL355309.1-201ENST00000442158 78 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AL365357.1-201ENST00000455621 357 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC103975.1-201ENST00000482506 483 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 RPL7AP23-201ENST00000482625 776 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC093270.2-201ENST00000486157 792 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC066616.1-201ENST00000486795 413 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC090255.1-201ENST00000495779 349 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 GAPDHP60-201ENST00000513846 995 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 RNU6-871P-201ENST00000516122 100 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 RNU6-1337P-201ENST00000516525 95 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SCARNA15-202ENST00000516881 127 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 SUMO2P16-201ENST00000519475 264 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AP000924.1-201ENST00000526605 720 ntTSL 2 BASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 HMGN2P36-201ENST00000529541 409 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC117372.1-201ENST00000548633 620 ntBASIC5.17□□□□□ -1.58
KRTAP3-3Q9BYR6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms