Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNA5SP446-201ENST00000515955 82 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 HMGB1P19-201ENST00000517578 577 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.92□□□□□ -1.46
RIPK4P57078 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.92□□□□□ -1.46
RIPK4P57078 C1GALT1P3-201ENST00000522049 819 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 OR8G5-201ENST00000524943 1041 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 HIGD1AP5-201ENST00000529959 259 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK4P57078 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.92□□□□□ -1.46
RIPK4P57078 AC023762.1-201ENST00000603280 584 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 AL121873.1-201ENST00000616013 524 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
RIPK4P57078 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK4P57078 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK4P57078 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.92□□□□□ -1.46
RIPK4P57078 UGT2B26P-201ENST00000508672 1613 ntBASIC5.92□□□□□ -1.46
RIPK4P57078 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK4P57078 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIPK4P57078 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK4P57078 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RIPK4P57078 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.91□□□□□ -1.46
RIPK4P57078 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 IGKV7-3-201ENST00000357453 298 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 RNA5SP151-201ENST00000365632 117 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 SNRPFP1-201ENST00000414761 252 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 TMSB10P2-201ENST00000416049 131 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 AL356387.2-201ENST00000422272 243 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 RPL21P91-201ENST00000429231 479 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK4P57078 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.91□□□□□ -1.46
RIPK4P57078 TXNP2-201ENST00000443918 295 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.91□□□□□ -1.46
RIPK4P57078 AC012671.1-201ENST00000451912 203 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 EIF2S2P5-201ENST00000457635 968 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 CYCSP34-201ENST00000458172 304 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.91□□□□□ -1.46
RIPK4P57078 AC090181.2-201ENST00000602975 672 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 BPIFA4P-203ENST00000603168 689 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.91□□□□□ -1.46
RIPK4P57078 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK4P57078 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 LINC01109-201ENST00000603837 3081 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 AL449283.1-201ENST00000602631 3403 ntBASIC5.91□□□□□ -1.46
RIPK4P57078 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RIPK4P57078 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.91□□□□□ -1.46
RIPK4P57078 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.91□□□□□ -1.46
RIPK4P57078 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK4P57078 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK4P57078 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK4P57078 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK4P57078 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK4P57078 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RIPK4P57078 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RIPK4P57078 AC016397.1-201ENST00000412463 242 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK4P57078 HMGB1P32-201ENST00000425971 565 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 NPM1P26-201ENST00000426339 738 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.9□□□□□ -1.46
RIPK4P57078 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.9□□□□□ -1.46
RIPK4P57078 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK4P57078 RPS6P2-201ENST00000454208 705 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 AL445433.1-201ENST00000457507 257 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 AC112206.1-201ENST00000468416 477 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 RN7SL481P-201ENST00000477764 299 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.9□□□□□ -1.46
RIPK4P57078 RPS4XP18-201ENST00000495480 763 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK4P57078 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK4P57078 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK4P57078 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.9□□□□□ -1.46
RIPK4P57078 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.9□□□□□ -1.46
RIPK4P57078 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.9□□□□□ -1.46
RIPK4P57078 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RIPK4P57078 RN7SL176P-201ENST00000580352 264 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.9□□□□□ -1.46
RIPK4P57078 AC005191.1-201ENST00000603950 358 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.9□□□□□ -1.46
RIPK4P57078 AC234782.5-201ENST00000617723 324 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 MIR6891-201ENST00000618788 93 ntBASIC5.9□□□□□ -1.46
RIPK4P57078 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RIPK4P57078 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK4P57078 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.9□□□□□ -1.47
RIPK4P57078 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIPK4P57078 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK4P57078 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIPK4P57078 A2MP1-204ENST00000566278 4130 ntBASIC5.89□□□□□ -1.47
RIPK4P57078 AC025031.4-201ENST00000621248 3271 ntBASIC5.89□□□□□ -1.47
RIPK4P57078 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms