Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC009166.2-201ENST00000624410 2833 ntBASIC8.21□□□□□ -1.1
NUBP1P53384 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
NUBP1P53384 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NUBP1P53384 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
NUBP1P53384 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NUBP1P53384 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NUBP1P53384 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NUBP1P53384 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
NUBP1P53384 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NUBP1P53384 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NUBP1P53384 MAPK10-313ENST00000641405 2469 ntBASIC8.21□□□□□ -1.1
NUBP1P53384 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 XRCC6P4-201ENST00000518193 2067 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
NUBP1P53384 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 RMRP-202ENST00000363046 264 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 RNU6-1329P-201ENST00000365664 107 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 SNORA69.1-201ENST00000390904 137 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AC084880.1-201ENST00000392530 545 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 RNU6-735P-201ENST00000410612 107 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 RN7SKP159-201ENST00000410657 292 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 RN7SKP296-201ENST00000411185 341 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 RNU6-516P-201ENST00000411381 104 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.2□□□□□ -1.1
NUBP1P53384 PPIAP10-201ENST00000438675 458 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AL031681.1-201ENST00000443304 400 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AC091180.1-201ENST00000462104 372 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AC116353.1-201ENST00000489727 316 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC8.2□□□□□ -1.1
NUBP1P53384 AC104057.1-201ENST00000515547 497 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.2□□□□□ -1.1
NUBP1P53384 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.2□□□□□ -1.1
NUBP1P53384 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 ATP5J2P4-201ENST00000538774 267 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC8.2□□□□□ -1.1
NUBP1P53384 MIR4504-201ENST00000577413 92 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AC024614.1-201ENST00000577546 307 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC8.2□□□□□ -1.1
NUBP1P53384 STX8P1-201ENST00000603161 355 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 ELOCP5-201ENST00000604924 333 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AL591516.1-201ENST00000611326 274 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 MIR1244-1-201ENST00000612829 85 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 AL121985.3-201ENST00000620690 523 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 MIR1244-3-201ENST00000635744 85 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 MIR1244-2-201ENST00000636449 85 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 MIR1244-4-202ENST00000636813 85 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
NUBP1P53384 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NUBP1P53384 AC010680.2-201ENST00000603521 2117 ntBASIC8.2□□□□□ -1.1
NUBP1P53384 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
NUBP1P53384 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.2□□□□□ -1.1
NUBP1P53384 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.2□□□□□ -1.1
NUBP1P53384 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 HAL-203ENST00000541929 3846 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 LRRC37A4P-202ENST00000581296 5372 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.19□□□□□ -1.1
NUBP1P53384 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NUBP1P53384 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.19□□□□□ -1.1
NUBP1P53384 AC009120.2-204ENST00000621548 2032 ntBASIC8.19□□□□□ -1.1
NUBP1P53384 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms