Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPL23AP37-201ENST00000479658 549 ntBASIC2.7□□□□□ -1.98
APOBP04114 RN7SL293P-201ENST00000481765 281 ntBASIC2.7□□□□□ -1.98
APOBP04114 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 PAICSP4-201ENST00000517543 1253 ntBASIC2.7□□□□□ -1.98
APOBP04114 AC012314.7-201ENST00000619693 93 ntBASIC2.7□□□□□ -1.98
APOBP04114 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC2.7□□□□□ -1.98
APOBP04114 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 ZNF833P-201ENST00000424938 1494 ntBASIC2.7□□□□□ -1.98
APOBP04114 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 ZNF402P-201ENST00000404435 3100 ntBASIC2.7□□□□□ -1.98
APOBP04114 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC2.7□□□□□ -1.98
APOBP04114 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
APOBP04114 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.7□□□□□ -1.98
APOBP04114 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC2.7□□□□□ -1.98
APOBP04114 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.7□□□□□ -1.98
APOBP04114 Z98200.1-201ENST00000607298 470 ntBASIC2.7□□□□□ -1.98
APOBP04114 AC073346.2-201ENST00000624724 2058 ntBASIC2.7□□□□□ -1.98
APOBP04114 AP001002.1-201ENST00000625148 1513 ntBASIC2.7□□□□□ -1.98
APOBP04114 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC2.7□□□□□ -1.98
APOBP04114 MALAT1-202ENST00000534336 8708 ntBASIC2.7□□□□□ -1.98
APOBP04114 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.7□□□□□ -1.98
APOBP04114 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC2.7□□□□□ -1.98
APOBP04114 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 ATP5F1P4-201ENST00000397288 746 ntBASIC2.7□□□□□ -1.98
APOBP04114 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC2.7□□□□□ -1.98
APOBP04114 AL691449.1-201ENST00000426570 421 ntBASIC2.7□□□□□ -1.98
APOBP04114 AC015914.2-201ENST00000618167 288 ntBASIC2.7□□□□□ -1.98
APOBP04114 OR6C71P-202ENST00000641886 1107 ntBASIC2.7□□□□□ -1.98
APOBP04114 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 PRNCR1-201ENST00000635449 12727 ntBASIC2.7□□□□□ -1.98
APOBP04114 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
APOBP04114 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
APOBP04114 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
APOBP04114 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
APOBP04114 AL356968.2-201ENST00000412769 1257 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.69□□□□□ -1.98
APOBP04114 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 AC091286.1-201ENST00000431233 461 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC008481.1-201ENST00000463278 396 ntBASIC2.69□□□□□ -1.98
APOBP04114 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.69□□□□□ -1.98
APOBP04114 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC2.69□□□□□ -1.98
APOBP04114 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
APOBP04114 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 ARHGAP42P3-201ENST00000443989 2508 ntBASIC2.69□□□□□ -1.98
APOBP04114 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
APOBP04114 RPL21P65-201ENST00000406094 466 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC104978.1-201ENST00000449387 391 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC110768.1-201ENST00000509222 400 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC105031.1-201ENST00000518550 476 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC010487.1-201ENST00000594408 1172 ntBASIC2.69□□□□□ -1.98
APOBP04114 AL356121.2-201ENST00000624715 780 ntBASIC2.69□□□□□ -1.98
APOBP04114 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 AC016588.2-201ENST00000632484 3021 ntBASIC2.69□□□□□ -1.98
APOBP04114 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 AL122016.1-201ENST00000403365 367 ntBASIC2.69□□□□□ -1.98
APOBP04114 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC2.69□□□□□ -1.98
APOBP04114 AC236972.1-201ENST00000433225 199 ntBASIC2.69□□□□□ -1.98
APOBP04114 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 PPIAP3-201ENST00000450588 505 ntBASIC2.69□□□□□ -1.98
APOBP04114 RNA5SP246-201ENST00000458909 119 ntBASIC2.69□□□□□ -1.98
APOBP04114 AC021660.1-201ENST00000465006 554 ntBASIC2.69□□□□□ -1.98
APOBP04114 SETP6-201ENST00000479329 568 ntBASIC2.69□□□□□ -1.98
APOBP04114 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.69□□□□□ -1.98
APOBP04114 NPM1P21-201ENST00000513394 762 ntBASIC2.69□□□□□ -1.98
APOBP04114 BMPR1APS1-201ENST00000403332 1598 ntBASIC2.69□□□□□ -1.98
APOBP04114 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
APOBP04114 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC2.69□□□□□ -1.98
APOBP04114 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
APOBP04114 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOBP04114 SNORA5A-201ENST00000384111 134 ntBASIC2.69□□□□□ -1.98
APOBP04114 MIR200C-201ENST00000384980 68 ntBASIC2.69□□□□□ -1.98
APOBP04114 MIR1289-1-201ENST00000408836 144 ntBASIC2.69□□□□□ -1.98
APOBP04114 TRIM60P17-201ENST00000415181 719 ntBASIC2.69□□□□□ -1.98
APOBP04114 AL590806.1-201ENST00000415818 853 ntBASIC2.69□□□□□ -1.98
APOBP04114 TMX2P1-201ENST00000436507 708 ntBASIC2.69□□□□□ -1.98
APOBP04114 OR52E3P-201ENST00000452083 936 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms