Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RHOT1P3-201ENST00000436571 331 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 RPL34P20-201ENST00000442771 351 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 CASP3P1-201ENST00000446037 609 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC108161.1-201ENST00000461060 402 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 RPL7P16-201ENST00000479738 738 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 NPM1P29-201ENST00000483112 803 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC105233.1-201ENST00000498840 781 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC140172.1-201ENST00000502928 141 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC097173.1-201ENST00000505862 819 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 COX6B1P5-201ENST00000509843 249 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC108471.1-201ENST00000513977 287 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC027338.1-201ENST00000514840 825 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 MTND1P36-201ENST00000522384 936 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 OR7E128P-201ENST00000532736 1024 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC124856.1-201ENST00000600819 896 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC023813.4-201ENST00000607580 580 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC092574.1-201ENST00000609771 420 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC110792.4-201ENST00000609843 298 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL627230.1-201ENST00000613077 211 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC245389.2-201ENST00000616023 576 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL591926.8-201ENST00000616876 211 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC242843.1-201ENST00000618702 573 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC004817.4-201ENST00000602396 3625 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC005332.5-201ENST00000591222 2919 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ZNF90P1-201ENST00000480493 1951 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 RN7SKP95-201ENST00000362860 303 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC007618.1-201ENST00000366455 732 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC010385.1-201ENST00000412374 256 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 OR5M12P-201ENST00000423388 929 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 BX119904.1-201ENST00000432026 348 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AP000949.1-201ENST00000438328 629 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AL589765.3-201ENST00000446084 462 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 KNOP1P3-201ENST00000446933 426 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 RN7SL443P-201ENST00000464331 290 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 RNU6-513P-201ENST00000516104 104 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 RNA5SP228-201ENST00000516232 133 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC008033.2-201ENST00000542626 177 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC006349.1-201ENST00000555526 235 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 MTND4LP25-201ENST00000570218 163 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms