Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC121333.1-201ENST00000567488 2709 ntBASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
VPS9D1Q9Y2B5 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 MAPK10-290ENST00000641237 2826 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 MAPK10-281ENST00000641170 3070 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AL512662.1-201ENST00000624850 2251 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 Y_RNA.167-201ENST00000363735 109 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RNU6-280P-201ENST00000364145 104 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 Y_RNA.378-201ENST00000365652 113 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RNU6-378P-201ENST00000384324 107 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 DSTNP4-201ENST00000399472 474 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 PKMP3-201ENST00000405497 715 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RPL21P24-201ENST00000413752 448 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RPSAP35-201ENST00000413753 818 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RPS10P21-201ENST00000430654 475 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RPS20P5-201ENST00000434808 360 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AL450996.1-201ENST00000445574 1202 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RPS27AP15-201ENST00000447672 466 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RPL7L1P8-201ENST00000469911 741 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC114801.2-201ENST00000503825 781 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC097460.2-201ENST00000511857 741 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RNU6-1016P-201ENST00000516689 94 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 ULK4P3-201ENST00000563895 440 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 Z98751.3-201ENST00000604447 521 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 MTND4LP5-201ENST00000605152 292 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 uc_338.33-201ENST00000614988 170 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC010378.1-201ENST00000619270 362 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AL445250.1-203ENST00000641829 1535 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC046144.1-201ENST00000478559 1853 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 AC092125.1-201ENST00000562568 1995 ntBASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.66□□□□□ -1.18
VPS9D1Q9Y2B5 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AL391417.1-201ENST00000404100 426 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 CTSLP8-201ENST00000413075 967 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 OR6C66P-201ENST00000414917 930 ntBASIC7.65□□□□□ -1.18
VPS9D1Q9Y2B5 AC011753.4-201ENST00000417974 311 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms