Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC011494.1-201ENST00000596454 237 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AC122710.3-201ENST00000606566 541 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AC011155.2-201ENST00000623202 216 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 U6.114-201ENST00000636407 96 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 U6.101-201ENST00000637707 76 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AC020978.8-201ENST00000571975 3022 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 AL035555.1-201ENST00000404462 1790 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LHX6Q9UPM6 TTC3P1-201ENST00000399586 6081 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 HDAC1P1-201ENST00000455482 1445 ntBASIC7.61□□□□□ -1.19
LHX6Q9UPM6 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC006141.1-201ENST00000581917 2170 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 IGKV7-3-201ENST00000357453 298 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 RNA5SP378-201ENST00000363646 120 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 RNU6-641P-201ENST00000384006 107 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 RN7SKP108-201ENST00000411367 328 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC244157.1-201ENST00000415642 163 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 RN7SL168P-201ENST00000463821 279 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC087879.1-201ENST00000474343 374 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC107385.1-201ENST00000507985 778 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 RNU6-1334P-201ENST00000516032 105 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 OR4C1P-201ENST00000530880 937 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC068790.3-201ENST00000602988 553 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AL031320.1-201ENST00000604177 357 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC133644.2-201ENST00000608142 540 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AP002765.1-201ENST00000528675 1507 ntBASIC7.6□□□□□ -1.19
LHX6Q9UPM6 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
LHX6Q9UPM6 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 AP003471.1-202ENST00000319051 1988 ntBASIC7.59□□□□□ -1.19
LHX6Q9UPM6 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 AL121886.1-201ENST00000358609 435 ntBASIC7.59□□□□□ -1.19
LHX6Q9UPM6 MIR335-201ENST00000362173 94 ntBASIC7.59□□□□□ -1.19
LHX6Q9UPM6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 RNU6-128P-201ENST00000383976 107 ntBASIC7.59□□□□□ -1.19
LHX6Q9UPM6 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 AL049758.1-201ENST00000423154 397 ntBASIC7.59□□□□□ -1.19
LHX6Q9UPM6 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.59□□□□□ -1.19
LHX6Q9UPM6 USP9YP30-201ENST00000430729 455 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms