Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AL627230.1-201ENST00000613077 211 ntBASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 AL365222.1-201ENST00000614661 98 ntBASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 MIR6813-201ENST00000621638 56 ntBASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 SALL4P7-201ENST00000555779 3120 ntBASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCAF1Q9H7N4 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 ZNF37CP-201ENST00000406795 241 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 RNU6-1203P-201ENST00000410703 110 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 FTH1P20-201ENST00000434913 548 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC022080.2-201ENST00000452932 533 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 RPL9P32-201ENST00000464118 620 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 CEACAMP3-202ENST00000483806 638 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC034222.1-201ENST00000494052 532 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC131392.1-201ENST00000506490 633 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC138866.2-201ENST00000508650 584 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC011411.1-201ENST00000509592 876 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 GUSBP9-201ENST00000510138 584 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC008716.1-201ENST00000511084 513 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 RNA5SP503-201ENST00000517047 117 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AC010332.1-201ENST00000620439 97 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 AL034408.1-201ENST00000637712 664 ntBASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SCAF1Q9H7N4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC130360.2-201ENST00000533477 1556 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 RBPJP6-201ENST00000411556 1431 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 Y_RNA.8-201ENST00000362353 102 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 RNU6-115P-201ENST00000364310 107 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AMELY-202ENST00000383036 621 ntTSL 5 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC096664.2-201ENST00000411843 406 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AL031733.1-201ENST00000422817 455 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 MED15P9-201ENST00000424716 533 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 FTH1P5-201ENST00000425761 545 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 RPL31P50-201ENST00000471002 296 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC087879.1-201ENST00000474343 374 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 RPL3P13-201ENST00000550415 216 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC007952.7-201ENST00000583141 757 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 MIR6505-201ENST00000617206 71 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 ASB8-218ENST00000629941 278 ntTSL 5 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 AC011592.1-201ENST00000624647 3634 ntBASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCAF1Q9H7N4 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 MIR335-201ENST00000362173 94 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 Y_RNA.105-201ENST00000363182 111 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RNU1-28P-201ENST00000383861 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RNU1-27P-201ENST00000383869 164 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms