Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 RNU5D-1-201ENST00000363299 116 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 SNORA32.2-201ENST00000384049 122 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 RNU2-42P-201ENST00000410697 113 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 RPL26P37-201ENST00000411983 438 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 RPL21P50-201ENST00000417698 477 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 BTF3P9-201ENST00000418784 283 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 MTCYBP10-201ENST00000424905 650 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 ISCA1P6-201ENST00000427740 390 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC104698.1-201ENST00000435671 276 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AL512605.1-202ENST00000441919 381 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AL590365.1-201ENST00000450788 243 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 RPL35AP28-201ENST00000459730 331 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 DYNLL1P6-201ENST00000503440 264 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AL390198.2-201ENST00000510553 222 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 PGAM4P2-201ENST00000512491 721 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 PRMT5P1-201ENST00000514351 598 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 RNA5SP438-201ENST00000516561 112 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 BTF3P12-201ENST00000519620 469 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC034105.3-201ENST00000565294 442 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC021646.1-201ENST00000605469 484 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC097467.4-201ENST00000605504 141 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 NMD3P1-201ENST00000439704 1488 ntBASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 NF1P2-201ENST00000556855 2505 ntBASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 AL355377.1-201ENST00000621125 1653 ntBASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 CUL4AP1-201ENST00000514750 1863 ntBASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL25A1Q9BXS0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC018765.1-201ENST00000623357 3446 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 U8.3-201ENST00000363321 132 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC117470.1-201ENST00000381974 330 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RNU6-1297P-201ENST00000384415 104 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 EI24P3-201ENST00000399046 1062 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 FAR2P2-201ENST00000413041 594 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC244452.1-201ENST00000413798 141 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RPL34P3-201ENST00000421454 338 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 FAR2P4-202ENST00000425399 584 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC091390.1-201ENST00000433904 331 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 TCEA1P1-201ENST00000449716 880 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AP006222.1-205ENST00000450734 457 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RNU7-152P-201ENST00000458982 64 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC091564.1-201ENST00000464563 479 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 MTND4P17-201ENST00000470444 350 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RN7SL727P-201ENST00000482164 296 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC108078.3-201ENST00000502633 489 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 CDH12P2-201ENST00000504393 298 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 RNA5SP418-201ENST00000515951 117 ntBASIC6.89□□□□□ -1.31
COL25A1Q9BXS0 COPS8P3-201ENST00000526024 482 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms