Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 AC119674.1-212ENST00000641155 993 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
KCNIP3Q9Y2W7 HSPD1P11-201ENST00000508643 1702 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RN7SKP171-201ENST00000364417 303 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RNU6-532P-201ENST00000384318 107 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RNU6-31P-201ENST00000384388 108 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RNU6-178P-201ENST00000384631 104 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 MIR320B1-201ENST00000390209 79 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AL021331.1-201ENST00000402817 582 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 NCSTNP1-201ENST00000406229 144 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 SDHDP6-201ENST00000414693 480 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RAC1P3-201ENST00000416129 580 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RGS17P1-201ENST00000423358 553 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 PPIAP13-201ENST00000434706 478 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 MRPS33P4-201ENST00000434892 317 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ELOCP10-201ENST00000440624 327 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 Z80107.2-201ENST00000445127 392 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CLIC4P1-201ENST00000453177 535 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RPL23AP2-201ENST00000471227 466 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RPL23AP65-201ENST00000475608 468 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 RN7SL41P-201ENST00000476144 297 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 EIF1P7-201ENST00000487533 337 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CDH12P2-201ENST00000504393 298 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC087477.6-201ENST00000559595 843 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC068714.1-201ENST00000559623 800 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ATP5J2P6-201ENST00000565203 266 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC010547.6-201ENST00000571789 193 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC138207.8-204ENST00000579588 527 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AL138895.2-201ENST00000603019 178 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ELOCP34-201ENST00000604436 327 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 COX6CP4-201ENST00000605798 228 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 AL121873.1-201ENST00000616013 524 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 Z98755.1-201ENST00000407015 1384 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 SMG1P6-201ENST00000532337 2930 ntBASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
KCNIP3Q9Y2W7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
KCNIP3Q9Y2W7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
KCNIP3Q9Y2W7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC083799.1-201ENST00000366451 910 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 SNORA70.10-201ENST00000384515 134 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AL645733.1-201ENST00000402250 217 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 U3.35-201ENST00000408405 208 ntBASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.08□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms