Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RNU6-723P-201ENST00000383973 107 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AL031985.1-201ENST00000392713 418 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RNU6-195P-201ENST00000411352 109 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 HMGB3P2-201ENST00000411913 584 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 DNAJC19P8-201ENST00000452887 259 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RNU6-329P-201ENST00000459618 107 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RPS27AP17-201ENST00000463344 455 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 FTH1P2-201ENST00000466086 412 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC091982.1-202ENST00000473923 343 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC104564.1-201ENST00000493028 407 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 VN1R104P-201ENST00000505115 1009 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 HMGN1P16-201ENST00000508308 283 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RFPL4AP3-201ENST00000515267 345 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RNU6-559P-201ENST00000516151 98 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RNA5SP441-201ENST00000516809 88 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 BTF3P12-201ENST00000519620 469 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC007375.1-201ENST00000554513 578 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 NRBF2P1-201ENST00000587407 859 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC006967.3-201ENST00000594086 1093 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AL158151.4-201ENST00000600965 507 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC125494.2-201ENST00000602431 657 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 MIR6748-201ENST00000610433 71 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 OR1N1-202ENST00000619659 939 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC069234.4-201ENST00000621276 412 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 uc_338.21-201ENST00000622458 147 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 U6.107-201ENST00000637108 79 ntBASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CNTNAP3Q9BZ76 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 AC011447.7-201ENST00000624228 1590 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 AC036108.4-201ENST00000611654 2516 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 AC006600.2-201ENST00000624834 2506 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 AL592429.1-201ENST00000403909 1473 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 RNU5D-1-201ENST00000363299 116 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 Y_RNA.176-201ENST00000363815 109 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 RN7SKP55-201ENST00000364888 307 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 SNORA32.2-201ENST00000384049 122 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 RNU6-1263P-201ENST00000384601 106 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 MIR16-1-201ENST00000385271 89 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 RNU6-316P-201ENST00000391027 107 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 U3.23-201ENST00000391132 200 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 AL109755.1-201ENST00000401791 649 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 PRELID1P2-201ENST00000407805 396 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 RNU6-1068P-201ENST00000410958 103 ntBASIC6.87□□□□□ -1.31
CNTNAP3Q9BZ76 AC009413.1-201ENST00000414823 399 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms