Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.27□□□□□ -1.41
ERCC4Q92889 AC067852.7-201ENST00000623270 535 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AP000676.3-201ENST00000623299 569 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AP001962.1-201ENST00000624114 559 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 LINC02211-204ENST00000642024 1070 ntBASIC6.27□□□□□ -1.41
ERCC4Q92889 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.27□□□□□ -1.41
ERCC4Q92889 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC4Q92889 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC4Q92889 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.27□□□□□ -1.41
ERCC4Q92889 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
ERCC4Q92889 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
ERCC4Q92889 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
ERCC4Q92889 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC4Q92889 BMS1P3-201ENST00000372011 932 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.26□□□□□ -1.41
ERCC4Q92889 SNORD65C-201ENST00000390962 71 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 RNA5SP296-201ENST00000410523 111 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC4Q92889 PTP4A1P1-201ENST00000420539 515 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC4Q92889 AC006065.1-201ENST00000422539 802 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC113412.1-201ENST00000425840 504 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 RPS4XP16-201ENST00000427198 791 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 MTND1P20-201ENST00000430341 950 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 AL035458.1-201ENST00000433096 585 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 RPL34P26-201ENST00000445636 354 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AL596266.1-201ENST00000448132 400 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 RN7SL583P-201ENST00000475692 287 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 OR2A20P-203ENST00000498397 1268 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.26□□□□□ -1.41
ERCC4Q92889 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC4Q92889 AC025458.1-201ENST00000506046 166 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.26□□□□□ -1.41
ERCC4Q92889 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 AC006499.4-201ENST00000510947 694 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC138938.1-201ENST00000515431 782 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC090819.1-201ENST00000523800 1111 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC4Q92889 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC4Q92889 AC006518.2-201ENST00000542513 940 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC4Q92889 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC4Q92889 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.26□□□□□ -1.41
ERCC4Q92889 MIR4310-201ENST00000582950 57 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 NBR2-204ENST00000587322 63 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 COX6CP7-201ENST00000597056 208 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC4Q92889 AL138895.2-201ENST00000603019 178 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC090425.2-201ENST00000608818 501 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC090607.5-201ENST00000615692 224 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 MIR6861-201ENST00000618657 64 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 OR1S1-201ENST00000624470 978 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.26□□□□□ -1.41
ERCC4Q92889 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.26□□□□□ -1.41
ERCC4Q92889 AC007671.2-201ENST00000637344 619 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC103706.2-201ENST00000638080 240 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 AC079097.1-201ENST00000512187 1399 ntBASIC6.26□□□□□ -1.41
ERCC4Q92889 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ERCC4Q92889 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
ERCC4Q92889 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.25□□□□□ -1.41
ERCC4Q92889 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 RNU6-83P-201ENST00000384568 112 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 RNU4-72P-201ENST00000410754 173 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 GPS2P1-201ENST00000411761 986 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC4Q92889 HMGB3P31-201ENST00000413333 595 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 TRGV6-201ENST00000417928 299 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 AC234781.4-201ENST00000419384 244 ntBASIC6.25□□□□□ -1.41
ERCC4Q92889 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ERCC4Q92889 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.25□□□□□ -1.41
ERCC4Q92889 AC127526.2-201ENST00000426436 775 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms